| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2608 |
|---|
| Symbol | |
|---|
| ID | 3693658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 3138420 |
|---|
| End bp | 3140225 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637732862 |
|---|
| Product | TPR domain-containing protein |
|---|
| Protein accession | YP_337758 |
|---|
| Protein GI | 76819571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGTCG GACATCCGGC GCGCCCTGAA ATTGAGCATC GGATTCGGCG GCATCAACAC
CGCGCTCTGT CTCGAGCGCT GTTGACGCTC GGCCGGAAAC ACGCTGTAGG CATGGGAAGC
AGGAACATGG GCGACTATCT GGCGCAGGAC GCGCGTATCG AGCGGATCAC GGTTCGCGAT
CCCGAGGCGC GGACATGGTT CGATCGCGGT CTGCTGTGGG CATACGGATT CAATTTCGAA
GCCGCGGTCG ATTGCTTTCA GGAAGCGGCG CGGATCGATC CGGATTGCGT GCTCGCCTAC
TGGGGCATCG CGTACGCGTC GGGCTGCAAT TACAACAAGC AGTGGAAGGT GTTTCATCCG
CGGATGATCG CGCGCTGCAT GAAGCTCGCG CGCGACGCGA TCCGGCGCGC GCAGGCGTGC
CGGGCGGGCG CGAGCGCGCT GGAGATGGCG CTCGTGCGCG CGATCGAGTG CCGCTTCCAG
GCCGAGGGCG CCCATGACGA AGCGCTGCTG CGGCGCTGGA ACGACGACTA CGCCCGCGCG
ATGCGCGACG TCTATCTGTC CTGCCCCGAC AATCTCGATG TCGCCGCGCT GTTCGCGGAC
GCGCTGATCA ATCGCACGCC GTGGAAGCTC TGGGACATGT CGAGCGGCAA GACCGCCGAC
GGCGCCGATA CCGACGAGGC GATCGCGGTT CTCGAGCGCG CGCTCGCGCA GGTCGACGCG
AACGGCCTCG CCCCGCATCC GGGGCTGCTG CACGTCTACA TCCACACGAT CGAAATGTCG
CCGACGCCGG AGAAGGCGCT TCGCGCGGCC GACGCACTGC GCGATCTCGC GCCCGACGTC
GGCCATCTGC TGCACATGGC CTCGCACATC GACATTCTTT GCGGCCACTA CCATGACGCG
ATCGTCGCGA ACGACCGCGC AATCGCCGCC AACCAGCGTG TGCTCGACCG CCATCCGCAG
TGGCTCGAAT TCCGGCTGTA CTGCGTGCAC GACATCCATT TCAAGATCTA TGCGGCGATG
ATGCTCGGCC GTTTCTCGGC GGCGTGGCAA GGGGTGCTCG AGCTCGAGGC GCTGATCACG
GAAGCGCTGC TGCGCGTCGA GCAGCCGCCG ATGGCCTACC TCCTCGAAGG CTTCCTGTCG
GTGCGCGTGC ACGTGCTGAT CCGGTTCGGC AAATGGCGCG AGATCCTCGA GCAGCCGTTC
CCCGCGAACG CCGCGCTGTA TTGCAACACG ACCGCGATGC TCCATTACGC GCGCGGCATC
GCCTACGCGA ACCTGAAGCT CGCCGGCCCC GCGGCGCAGG CGCGCCGCGC GTTCTCGATC
GCGCAGGCGG CCCTTCACGA GCATCGGTAC GTGACGAACA ACACCTGCGC GGATCTGCTG
AAGATCGCCG CTTGCGTGCT CGACGGCGAG ATCGCGTATC ACGAGGACCG GTTCGACGAA
GCGTTCGCGC ATCTACGGCG CGCGGTCGAA CTCGACGACG GGCTCGAATA CATGGAGCCG
TGGGGCTGGA TGATGCCGAC GCGCCACCCG CTCGGCGCGC TGCTGCTCGC GCAAGGGCAT
GTCGAGGAAG CCGAGCGCGT CTATCGCGCC GATCTCGGGC TCGATTCGAC GATCTACCGC
TCGCTCCAGC ATCCGGGCAA CGTGTGGAGC CTGCAGGGCT ACGTGAGCTG CCTGCGCAGG
CTCGGCAAGC ACGAAACGGC GGACGCGCTG CAACCGGCGC TCGACGTCGC GCGCGCGCGA
GCCGACGTCG AGATCGGCGT GTCGTGCTTC TGCGCCGCGC CCAGCAAGCG CGGTTGCTGC
CACTGA
|
|---|
| Protein sequence | MRVGHPARPE IEHRIRRHQH RALSRALLTL GRKHAVGMGS RNMGDYLAQD ARIERITVRD
PEARTWFDRG LLWAYGFNFE AAVDCFQEAA RIDPDCVLAY WGIAYASGCN YNKQWKVFHP
RMIARCMKLA RDAIRRAQAC RAGASALEMA LVRAIECRFQ AEGAHDEALL RRWNDDYARA
MRDVYLSCPD NLDVAALFAD ALINRTPWKL WDMSSGKTAD GADTDEAIAV LERALAQVDA
NGLAPHPGLL HVYIHTIEMS PTPEKALRAA DALRDLAPDV GHLLHMASHI DILCGHYHDA
IVANDRAIAA NQRVLDRHPQ WLEFRLYCVH DIHFKIYAAM MLGRFSAAWQ GVLELEALIT
EALLRVEQPP MAYLLEGFLS VRVHVLIRFG KWREILEQPF PANAALYCNT TAMLHYARGI
AYANLKLAGP AAQARRAFSI AQAALHEHRY VTNNTCADLL KIAACVLDGE IAYHEDRFDE
AFAHLRRAVE LDDGLEYMEP WGWMMPTRHP LGALLLAQGH VEEAERVYRA DLGLDSTIYR
SLQHPGNVWS LQGYVSCLRR LGKHETADAL QPALDVARAR ADVEIGVSCF CAAPSKRGCC
H
|
|---|
| |