| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2406 |
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| Symbol | pbpC |
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| ID | 3694201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 2913948 |
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| End bp | 2916803 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637732660 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_337556 |
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| Protein GI | 76817864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.806049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGGT TGGCGTCGAC GCTCGCGCGG CGGGCCGCGC AGGCGGCCGT GCCGCGATGG
GTTTGGCCGT TCGCCCGACC GGCCGGGTGG TCGCTCGGTC CGATGTGCGG TCCGGTGTGC
GGTCCGGTGT GCGGTCCAGT GTTCGGTTCG GTGTTCGGTT CGGTGTTCGG TTCGGTGTTC
GGTTCGGTGT TCGGTTCGGT GTTCGGTTCG GTGTTCGGTT CGGTGGTCGG TTCGGTGGTC
GGTTCGGTGG TCGGTTCGGT GTTCGGTCCG GTGTTCGGTC CGGTGTTCGG TTCGGTGTTC
GGTTCGGCGT TCGCGGCGTT CGCGGCGTTC GGTCTCGCGC TCGCCCCCCT GCTCGCCGCG
CCGCCCGTTC GGCCGCGCGC CCGGCGGAAC CCGCGCCCGT GCGGCTCGCC GCGGCGCGCG
GCGCTCCCGC GCGCGCGAAC GGCGGCGAGC CGCACGCTCG CCGTCGCGAT GCTCGCCGCG
CCGCTCGCCG CGCACGCGCT GCCGGCCTAC GACGACGTGC GGCGCGACTG GCGCAGCACC
GACTGGTTGC TGCTCGCACG CGACGGCACG CCGCTTCAGC GCACGCGCGT GGAGCTCACC
GAGCGGCGCG GCGACTGGAT CGCGCTCGCC GACGTATCGC CCGCGTTTCG CGAGGCGATC
GTCGTATCGG AGGACAAGCG CTTCTACGCG CACAGCGGCG TCGACTGGCG CGGCATCGCG
GGCGCCGCAT GGGGCAATCT GTGGAACGAG CGCACGCGCG GCGCGTCGAC GGTGACGATG
CAGCTCGCCG GCCTGCTGAG CGACACGCCG CGCCGCTCGG GCCAGCGTTC GCTGCCGCAG
AAGGCCGCGC AGGCGATGAA CGCGCTGCGG CTCGAACGCG GCTGGCGCAA GGATCAGATC
CTCGAGGCGT ATCTGAATCT CGTGCCGTTT CGCGGCGAGA CGGTCGGGCT CGACGCGATG
TCGCACGCGC TGTTCGGCAA GGCGCCGTCG GGGCTCGACG TGCGCGAATC GGCGGTGGCC
GCCGCGCTCG TGCGCGCGCC GAACGCGTCC GCCGCGAAAG TGGCCGAACG CGCGTGCCGG
ATCCTGCGCG ACCTGCGCGC CGCGCAACCG TGCGAATCGC TCGACGGCTA CGTGCGCTTC
GTGACGTCCG CCCCGCCGGG CGCCGCGCGC GACGGCGGCG AAGCGCTCGC GCCGCACTTC
GCGCGGCGCG TCGCGGCCGA GGTGAAGCCC GGCGCGGGCG CGCGCGTGCG CTCCACGCTC
GACGCGCCGC TGCAGCGCTT CGCGCGCGAC ACGCTCACGC GCGCGCTCGC CGAGCTCAAC
GCGCCCGCCC ATCGGCGCCA CGTGCAGGAC GGCGCGGTCG TCGTGATCGA CAACGCGACG
GGCGAGATCC GCGCATGGGT CGGCTCGTCG GGCGCGCTGT CGGCCGCGCG CGACGTCGAC
GCGGTGCTCG CGCCGCGCCA GGCCGGCTCG ACGCTCAAGC CGTTCCTCTA CGCGCAGGCG
CTCGACGAAC GGCGCCTCAC CGCCGCTTCG CTGCTCGACG ACGCGCCGAT CGATCTCGCC
GCGGGCGGCG GCCTGTACAT CCCGCAGAAC TACGACAAGC ACTTCAAGGG CTGGGTCAGC
GTGCGCACCG CGCTCGGCGG ATCGCTGAAC GTGCCGGCCG TGCGCACGCT CGTGCTCGTC
ACGCCGCACC GCTTCGCGCG CACGCTCACC GCGCTCGGGC TGCCGCTCGC CGAAGAAGGC
GATTACTACG GTTTCAGCCT CGCGCTCGGC AGCGCCGACG TCACGCTGCT GTCGCTCGCG
AACGCGTACC GCGCGCTCGC CAACGGCGGC GTCGCGCGGG CGACGCTCGA CGTGCCGGGC
GGAAGCGGAA GCCGGAACGG AAACGGAAAC GGAAACGGAA ACGGAAACGG AAACGGAAAT
GACGCCGTCA CGTCGGCCCC GTTCGCGCCG GCCGTTTCGA AATCGAAGGT TGGCGCGTCA
GCGGTTTTCC CGCGGGCCGT CTCGACGAAG GCCGAGCCCG CGAAGCCAGT GCCCACGGCG
GCCCTTTCCC CCACGAGCGC TTCGACATCG ACCGCCGGCA AGCCGGCGGC GCACGCCGCA
GCGGGCACGC GCGTATTCAG CGAAGCCGCG GCGTACATCG TCACCGACAT CCTCGCCGAC
AACAACGCGC GCGTGCGCAC GTTCGGCTTC GACAGCCCGC TCGCGACGCG CTTCTTCTCC
GCCGTCAAGA CGGGCACGAG CAAGGACATG CGCGACAACT GGGCGCTCGG CTACACGTCG
CGCTACACGG TGGGCGTGTG GGTGGGCAAC GCGGACGGCT CGCCGATGTG GGACGTATCG
GGCGTCACGG GCGCGGCGCC CGTGTGGGCC GCGATCGTCG GCTATCTGCA CCGCGATCTC
GCGAGCCGCG CGCCGCGCCC GCCCGCCGGC GTCGAGCAGC GCCGCGTCGC GTTCGAACGC
GACGTCGAGC CCGCGCGCCC CGAGTGGTTC ATCGCCGGCA CCGCGCTCGA CACGGTGCGC
CTCGCCGCGC CCGCGACCGC CGCCGCGGGC GGCGCAGACC GGCCGCGCGC GCCGCTTTCG
ATCGGCGCGC CGACCGACGG CACGATCTTC GCGATCGACC CGGACATCCC GCCGAAGCAC
CAGCGAATCT GGTTCGAGCG CGCGGCGGGG CGCGCGGCGC GCTTCTCGTG GCGGCTCGAC
GGCAAGGTGA TCGGCCGCGG CGAGCGCCTC GCGTGGATGC CGTGGCCGGG ATCGCACCGG
CTCGAGCTCG TCGACGCGCG CGGCAACGTC GCCGACGCGG TCGGCTTCGA GGTGCGCGGC
GCGTTCGCGA AGACGGCGGC CCCACCGAAG CCGTGA
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| Protein sequence | MNGLASTLAR RAAQAAVPRW VWPFARPAGW SLGPMCGPVC GPVCGPVFGS VFGSVFGSVF
GSVFGSVFGS VFGSVVGSVV GSVVGSVFGP VFGPVFGSVF GSAFAAFAAF GLALAPLLAA
PPVRPRARRN PRPCGSPRRA ALPRARTAAS RTLAVAMLAA PLAAHALPAY DDVRRDWRST
DWLLLARDGT PLQRTRVELT ERRGDWIALA DVSPAFREAI VVSEDKRFYA HSGVDWRGIA
GAAWGNLWNE RTRGASTVTM QLAGLLSDTP RRSGQRSLPQ KAAQAMNALR LERGWRKDQI
LEAYLNLVPF RGETVGLDAM SHALFGKAPS GLDVRESAVA AALVRAPNAS AAKVAERACR
ILRDLRAAQP CESLDGYVRF VTSAPPGAAR DGGEALAPHF ARRVAAEVKP GAGARVRSTL
DAPLQRFARD TLTRALAELN APAHRRHVQD GAVVVIDNAT GEIRAWVGSS GALSAARDVD
AVLAPRQAGS TLKPFLYAQA LDERRLTAAS LLDDAPIDLA AGGGLYIPQN YDKHFKGWVS
VRTALGGSLN VPAVRTLVLV TPHRFARTLT ALGLPLAEEG DYYGFSLALG SADVTLLSLA
NAYRALANGG VARATLDVPG GSGSRNGNGN GNGNGNGNGN DAVTSAPFAP AVSKSKVGAS
AVFPRAVSTK AEPAKPVPTA ALSPTSASTS TAGKPAAHAA AGTRVFSEAA AYIVTDILAD
NNARVRTFGF DSPLATRFFS AVKTGTSKDM RDNWALGYTS RYTVGVWVGN ADGSPMWDVS
GVTGAAPVWA AIVGYLHRDL ASRAPRPPAG VEQRRVAFER DVEPARPEWF IAGTALDTVR
LAAPATAAAG GADRPRAPLS IGAPTDGTIF AIDPDIPPKH QRIWFERAAG RAARFSWRLD
GKVIGRGERL AWMPWPGSHR LELVDARGNV ADAVGFEVRG AFAKTAAPPK P
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