| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2154 |
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| Symbol | pchI |
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| ID | 3694373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2629191 |
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| End bp | 2630975 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637732408 |
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| Product | ABC transporter |
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| Protein accession | YP_337305 |
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| Protein GI | 76817900 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.513956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCCT GGATGAAGCG ATGGCGATGC TTGCCGGCCG ACACGCGGCG CAGCCTGGTT
CGCGGCGTCG GCTGGGCGGT GGCCGCCGCG CTGCTCGACG GCCTGTGCGG CGTGCTGCTG
GTGCCGCTCA TTCGTGCGTG GTTCGCGGGC GGCGCGCTGC TGCACTGGGC GGCGGCGCTC
ATCGCGCTGA CGCTCGGCCA TGCGCTCGTG CTGTACGCCG CGCAGCTCGG CGGCTATCGC
GCGGGCGGCG CGCTCGCGCT CGGGCTCGTC GATCGCCTGG TGCGCCATCT GCCGCGCATC
GCCGCGCCGC AGACCGTGCG CGACAGCGAT CCGGAGGGCC TGCTGCGCGG CCCGGTGATG
CAGGCGATGG GCATTCCCGC GCATCTGCTC GGGCCGCTGA TCGGCGCGGT GGTCACGCCG
CTCGCGGTGG TCGCGGGGCT CGCGGCGATC GATTGGCGGA TCGCGCTGTG TCTCGCCGCC
GCGGCCGCGC TGCTGTTCGC GCTGCTCAAC CGCAGCGGCG CGCGCACGCT GGCGCTCGAA
GAGGCGCGCG CGGCGGGCGA GCGCGACCTG GCCGAGCAGC TTCAGGCGTT CGCCGCGCAT
CAGGGGCTGC TGCGTTTCGC CGGGCGGGAC GGCAGCGGGC GCGCGGCGCT GCAGCGCGCG
CTCGACGAGC GGCATCGCCG CGCCCGCGCG CTGATGCGGC GTTCGTTGCC GCTCGAGCTC
GGTTTCGCGG GAGCGGTGCA GGCGGTGTTC GTCGCGATGC TGGTGGGCGG CGCGGCGGCG
GTCGCGGCCG GCCGGCTCGA CCCGGCGACC GTCGTCGCGG TGCTCGTGCT GCTCGTGCGC
TTCATCGAGC CGCTCGCGCA GCTGACGCAG CTCGACCAGG CGCTGCGCGG CGGCTGGCGC
GCGCTCGACG CGGTGCTGAC GGTGCTGCAC GCACCGCGCT TCGAAAGCCC CGAGCGCGGC
CTGCGGCCGC AGGACGCGAG CGTCGCGGCG GTGCGGGTCG GCTATCGGTC GGAGACGGGC
GCGACACTGC TCGACGACGT CGACCTGCAC TGCCCGGCGG GCGGGTTCGT CGCGATCGTC
GGGCCGACGG GCGCGGGCAA GAGCACGCTG CTCGGCCTGC TCGCGCGGCT CGACGATCCG
TCGAGCGGCC GCGTGCTGTT CGGCAACGTC GATTTGCGGC GCTTGAGCGA GACGACGCTC
GCCGGCGCGC GCACCGTCGT GTTCCAGCAT AGCGGCCTGT TTCGCGGCAG CCTCGGATGG
AATCTGCGGA TGGGCCGCCC CGATGCGAGC GGCGCGGCGC TCGATGCGGT GCTGGACGCG
CTCGGGCTGT CGCGCGACGT CGAGCGTTTG CCGCACGGGC TCGACACCGA CGTCGGGCCG
GGCGGTCAAT TGCTGTCGGG CGGGCAGCGC CAGCGCGCGT GCATCGCGCG CGGGCTGCTC
GCGAAGGCGC CGCTGCTGCT GCTCGACGAG CCGACCGCGA GCCTCGACGA GCTGAGCGCG
CGGCGCGTGC GGGACTGCCT CGTCGCGATG CGCGGGCAGC GCACGCGCAT CGTCGTCACC
CATCATCCGG CGCTCGCGCG CGCCGCCGAC GAGATCGTCG TGCTCGAGGC CGGCCGCGTG
CGGGCGCGCG GCACGCACGC GCAGCTCGTC GCGGCCGATC CGTGGTATGC GGAATTCGCC
CGCGCCGAAA GCGAGTGCGA ACGCGAGCCC GAAGTCGAGA CGCCGGTCAC GGCCACAGCC
GGTATTTCGG CGCCGGCGCG CGGGGCGGAT GCCGGACATC GATAG
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| Protein sequence | MTAWMKRWRC LPADTRRSLV RGVGWAVAAA LLDGLCGVLL VPLIRAWFAG GALLHWAAAL
IALTLGHALV LYAAQLGGYR AGGALALGLV DRLVRHLPRI AAPQTVRDSD PEGLLRGPVM
QAMGIPAHLL GPLIGAVVTP LAVVAGLAAI DWRIALCLAA AAALLFALLN RSGARTLALE
EARAAGERDL AEQLQAFAAH QGLLRFAGRD GSGRAALQRA LDERHRRARA LMRRSLPLEL
GFAGAVQAVF VAMLVGGAAA VAAGRLDPAT VVAVLVLLVR FIEPLAQLTQ LDQALRGGWR
ALDAVLTVLH APRFESPERG LRPQDASVAA VRVGYRSETG ATLLDDVDLH CPAGGFVAIV
GPTGAGKSTL LGLLARLDDP SSGRVLFGNV DLRRLSETTL AGARTVVFQH SGLFRGSLGW
NLRMGRPDAS GAALDAVLDA LGLSRDVERL PHGLDTDVGP GGQLLSGGQR QRACIARGLL
AKAPLLLLDE PTASLDELSA RRVRDCLVAM RGQRTRIVVT HHPALARAAD EIVVLEAGRV
RARGTHAQLV AADPWYAEFA RAESECEREP EVETPVTATA GISAPARGAD AGHR
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