Gene BURPS1710b_A2109 details

Gene Information

• Locus tag: BURPS1710b_A2109
• ID: 3692994
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 2570064
• End bp: 2570726
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637732363
• Product: V4R domain-containing protein
• Protein accession: YP_337260
• Protein GI: 76819216
• COG category: [R] General function prediction only
• COG ID: [COG1719] Predicted hydrocarbon binding protein (contains V4R domain)

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCGTT CTCAGCCCGT TTTCAACCGA TCCGATACAG GACACGCGCG TGCTCGACGA 
GCGTCGGCGC GTGGACGATG CCGCGCGTGC GCCGAGGGCG CCGCGCGTTT TACCCCACGG 
AGTCACACGA TGCAACCGCA ACTGCCGATC GACGTCGATC CGAACACCGG CGTCTGGACC 
ACCGACGCGC TGCCGATGCT GTACGTGCCG CGCCATTTCT TCACGAACAA CCATACGGCG 
GTGGAAGAGG CGCTCGGCCG CGACGCCTAC GCGGACATCC TCTACCGCGC CGGTTACAAG 
TCGGCGTATC ACTGGTGCGA CAAGGAGGCG AAGCAGCACG GGATCGCCGG GATGGCGGTG 
TTCGAGCATT ACCTGAAGCG CCTGTCGCAG CGCGGCTGGG GCCTGTTCTC GATCGTCGAA 
GCCGAGCCGG CCGCCGCGCG CGCGAAGATC GAACTGCGTC ATTCGTCGTT CGTGCTCGCG 
CAGCCGGGCA AGGAAGGCAA GCTTTGCTAC ATGTTCGCCG GCTGGTTCGC GGGCGCGCTG 
GACTGGGTCA ACGACACGAC GCCGGAAGGC CGCGGCGCGC CGCGCGCGCG ATCGGCGGAA 
GCGCAGTGCG CGGCCGAGGG CCATGACCAT TGCGTCTTCG AAGTGTCGCC GATCGCGCGC 
TGA 

 

Protein sequence

MLRSQPVFNR SDTGHARARR ASARGRCRAC AEGAARFTPR SHTMQPQLPI DVDPNTGVWT 
TDALPMLYVP RHFFTNNHTA VEEALGRDAY ADILYRAGYK SAYHWCDKEA KQHGIAGMAV 
FEHYLKRLSQ RGWGLFSIVE AEPAAARAKI ELRHSSFVLA QPGKEGKLCY MFAGWFAGAL 
DWVNDTTPEG RGAPRARSAE AQCAAEGHDH CVFEVSPIAR