| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2097 |
|---|
| Symbol | rhlC |
|---|
| ID | 3692779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2554680 |
|---|
| End bp | 2555675 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637732351 |
|---|
| Product | rhamnosyltransferase II |
|---|
| Protein accession | YP_337248 |
|---|
| Protein GI | 76818923 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | [TIGR01556] L-rhamnosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0099449 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCT TGGGCGCGCT GGTGATTCTG TATTACCCGA CCGACGAGCA ACTGTCGGGC
CTGGAGGCGC TCGCGCGCGA CAGCGACGCG CTCGCGGTGA TCGACAACAC GCCGCACGAG
CACGCGGCGG CGCGCGAGCG GGTGCGCGCG CTGGCGGCGC GGGCGCACGG CGAAGCGCGC
GTCGTGTGGC GGCACCACGG CAACCGCGGC GGGGTGGCGG GCGCGTACAA CGCGGGGCTG
TCGGCGCTGT TCGCGCAGGG CATGGAGGCG GTCGCGCTGT TCGACCAGGA CTCGACGGTG
CCGGCCGCGT ACTTCGCGCG GATGCGCGAC GCGTGCGCGC AACTGGGTAC GCAACCGGGC
GCGCACGCGG GCGCGTTCAT CGCGGGCCCG CGGATCTACG ACGCGAACGA GCAGCGCTTC
CTGCCGGAGC TGATGACGAG CGGGGTGGCG GTGCGCCGCG TGCGGGTGGA AGGCGAGCGC
GCGCCGCAGC GCTGCGCGTT CCTGATCTCG TCGGGCAGCG TGATCTCGCG GGGCGCGTAC
GCGCGGCTCG GCCGCTTCGA CGAGGCGCTG TTCATCGACC ATGTCGACAC CGAGTACTGC
CTGCGCGCGC TGGCGCACAA CGTGCCGCTG TACGTGGTGC CGTCGCTGGT GCTGACGCAC
CGGATCGGCG CGCGGCGCCG GCACAAGGTG GGGCCGTTCG AGCTGACGGC GATGCACCAT
GGGTGGCTGC GCCGATACTA CGGCGCGCGC AACGCGATGC AGTTGGGGCT GCAGTACGGG
TTGCGGTTTC CGGTGGCGCT GGTGCCGAAT CTGCTGACGA TCTGGCAGGT GGTCCAGGTG
GTGCTGTGCG AGCGGGAGAA GGGCGCGAAG CTGCGCGGGA TCGCGCTGGG CGTGCTCGAC
GGGGTGTTCG GGCGCCTGGG GTCGTTCGAG GCGGCGCGCG CGGGCCACCG CACGGCACGC
GAGGAGGCGA TGCGCGAAGC GCGGCAGCAG TCGTGA
|
|---|
| Protein sequence | MTTLGALVIL YYPTDEQLSG LEALARDSDA LAVIDNTPHE HAAARERVRA LAARAHGEAR
VVWRHHGNRG GVAGAYNAGL SALFAQGMEA VALFDQDSTV PAAYFARMRD ACAQLGTQPG
AHAGAFIAGP RIYDANEQRF LPELMTSGVA VRRVRVEGER APQRCAFLIS SGSVISRGAY
ARLGRFDEAL FIDHVDTEYC LRALAHNVPL YVVPSLVLTH RIGARRRHKV GPFELTAMHH
GWLRRYYGAR NAMQLGLQYG LRFPVALVPN LLTIWQVVQV VLCEREKGAK LRGIALGVLD
GVFGRLGSFE AARAGHRTAR EEAMREARQQ S
|
|---|
| |