Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1695 |
Symbol | |
ID | 3692098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 2069429 |
End bp | 2073145 |
Gene Length | 3717 bp |
Protein Length | 1238 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637731949 |
Product | hypothetical protein |
Protein accession | YP_336852 |
Protein GI | 76817970 |
COG category | [S] Function unknown |
COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCATCC GCCCGCCGCC TCAAAATAAT TTAATTAACG AAAATCAATT CAACGAGACC GGACGAGCGC AATCGAACGA ATCGGATTTC CCCGATCGTC GCGCCGGCAA ATTGATCGAT GCGCTGTGGG TTTTCGGGAT AACGATCACA CCGATCAGGA AAGGACCTGT CCATGGCGAT CTCGCGTCAG GCGCTGTTCG GGAAACTCGG GGCTACGCTC TTCAGGGCGA TCGAATCGGC CACGGTTTTC TGCAAGCTGC GCGGCAATCC GTACGTCGAG CTGGTGCACT GGCTGCAGCA GTTGTTGCAG CAGTCCGACT CCGATCTGCA CCGGATCGTG CGGCACGCCG GCATCGAGCG CGACGCGCTC GATCGCGACA TCGCGCGCGC GCTCGCCGCG CTGCCGGCCG GCGCGGGCTC GATCAGCGAT TTTTCCCATC ACGTCGAAAC CGCGATCGAG CGCGCATGGG TGCTCGCGAC GCTGCGCTTC GGCGACCGGC GCATCCGCGG CGCATGGCTC GTCGCCGCGC TCGTCGATAC GCCGGAACTG CGGCGCGTGC TGCTTTCCAT TTCGCCGGCG TTCGCGAGGA TTCCTCACGA CGACGCTCTC GACGACGTGC TGCCCGCGTG GACGGCCGGT TCGCCGGAAG CGGCGGACGC GCCGTACGAC CACGCCGATT CCGCGCCCGC TTCGCCGGGC GAGCCGTCCG GCGCGACGCG CGCCGCGCCG AACGGCTCGC CGCTCGAGCG ATATTGCACG GACCTGACCG CGCGCGCTCG CGACGGCGAC ATCGACCCCG TCATCGGGCG CGAGCTCGAA ATCCGCACGA TGACCGACGT GCTACTGCGG CGCAGGCAGA ACAATCCGCT GCTCACCGGC GAGGCGGGCG TGGGCAAGAC GGCCGTCGTC GAGGGCCTCG CGCTCGCGAT CGCGAACGGC GACGTGCCGC CGAAGCTGGC CGACGTGCGC CTGATGAGCG TCGACGTGGG CGCGCTGCTG GCCGGCGCGG GCATGAAAGG CGAATTCGAA TCGCGCCTGA AAGGCGTGCT CGAGGCCGCG GCGAAATCCG TCGCGCCCGT CATCCTGTTC GTCGACGAGA TTCACACGCT GATCGGCGCG GGCGGACAGG CCGGCACGGG CGACGCGGCG AACCTGCTCA AGCCCGCGCT CGCGCGCGGC ACGATCCGCA CGATCGGCGC GACGACATGG GCGGAGTACA AGCGGCACAT CGAAAAGGAT CCCGCATTGA CCCGCCGCTT TCAGGTGCTG CAAGTGCCGG AGCCCGAAGA GCCGGCCGCG GTGCACATGG TGCGGGGCGT CGCGCGAGCG TTCGCGCGGC ACCACCGCGT GACGGTGCGC GACGAGGCGA TCCGCGCCGC CGTCGCGCTG TCGCACCGCT ACATTCCGTC GCGGCATCTG CCGGACAAGG CGATCAGCCT CCTCGACACC GCATGCGCGC GCGTCGCGCT CTCGCAGCAC GCCGCGCCCG GCGAACTGCA GCACGTGCGC CAGCGCTTGC TCGCGGCGCG CGCCGAGCGC GATCTGCTCG AACAGGAGGC GCGCATCGGG CTCGACGCCG GGCAATCGCT CGCGGCGGTG CGCGAACGCA TCGAAGCGCT CGCGGCCGAG GAAGCGGCCG TCGACGCGCG CTGGAAGGCG CAGGCCGACG CGGCGCGCGC GCTGCTCGCC GCGCGCGAGG CCGCGCTCGC GGAATGTCAC CGCGAGTCTT GCGCCGAAAC GCGCGCCGGC TCGCTCTCCG AATCTCGTAC CGAATCTCGT ACCGAATCGC GCGCCAGATC ACACATCGAC TCCAGCGCCT GTGCTCACAG CGACGTCCCG GCCGAAATGC ACGCCGGTTC GCGCACCGCA ACGCGTCCGG ACACGCACGC CGAAGCGCAC GCCGCCCCCG CCTCGCCCCC GCCCGCCGCC GATACGCCGC ACGCAGGCGC CGCCCCCGGG CTGCGCGAGC TCGAACGCGC GCTCGCGGCG GCCCAGGGCG ACGCACCGCT CGTGTTCCCG GAAGTCGACG AGGCGATCGT CGCGCAGATC GTCGCGGATT GGACCGGCAT TCCGGTCGGC CGCATGATGA CCGACGAAGT CGCCGCCGTG CGCGCGCTGC CCGCGACGCT CGAGGCGCGC GTGATCGGCC AGCCCGACGC GCTGCGGCAG ATCGGCGAGC GCGTGCAGAC CGCGCGCGCG GGCCTCGCCG ATCCGAAGAA GCCGCTCGGC GTATTCCTGC TTGCGGGCCC GTCGGGCGTC GGCAAGACCG AAACGGCGCT CGCGCTCGCC GAGGCGCTGT ACGGCGGCGA ACAGAGCCTG ATCACGATCA ACATGAGCGA GTACCAGGAA GCCCACACCG TGTCGGGCCT CAAGGGCGCG CCGCCCGGCT ATGTCGGCTA CGGCGAGGGC GGCGTGCTGA CCGAGGCGGT GCGGCGGCGG CCGTACAGCG TCGTGCTGCT CGACGAGATC GAGAAGGCGC ACCGCGACGT GCACGAACTC TTCTTCCAGG TCTTCGACAA GGGCTACATG GAAGACGGCG ACGGCCGCTA CATCGATTTC CGCAACACGA CGATCCTGCT CACGAGCAAC GTCGGCGCGG AACTGAGCGC GAGCCTGTGT GCCGACGCAT CGCTCGCGCC CGATGCCGCC GCGCTGCGCG ACGCGCTCAT GCCCGAACTG CTGAAGGTCT TCCCCGCCGC GTTCCTCGGG CGCGTGAGCG TCGTGCCGTA CCGGCCGCTC GAAGCGCGCG CGCTCGCGCG CATCGTGCGC CTGCATCTGG ATCGCGTCGT CGCGCGCATG GCCGAGCGGC ACCGCATCGC GCTCGCGTAC GACGACGCCG TCGTCGACTA CGTCGTCGGG CGTTGCCTCG TGCAGGAAAC CGGCGCGCGG CTGCTGATCG GATTCATCGA GCAGCACGTG CTGCCTCGGC TGTCCGCGCT GTGGCTCGAC GCGTTCCCGT CGAAGGCGGC GCTCGCGCGC ATCGACATCG GTGTGGCCGA CGCGGCCGCG CCCGCGGCGC GCGCGCTCGT CTTCCGGCCC GGCCAAGCAA GCCGGGCGGG GCCGCCGAAC GCGCCGCTCA CCGCCGTGCA GGCCGGCTAG CCCTGCTGTC TTTCCCTTCA CTCACGGAGT CCCGCATGTC CGCATCCAGC AGCTCTCAAA AATTCATCGC GCGCAACCGC GCGCCCCGCG TGCAGATCGA ATACGACGTC GAAGTCTACG GCTCGGAAAA GAAGGTCGAA CTGCCGTTCG TGATGGGCGT GCTCGCCGAC CTGTCGGGCA AGCCGGTCGC GCCGCTGCCC GCCGTCGCCG ACCGGCGCTT CCTCGACATC GACATCGACA ACTTCGACGA GCGGATGAAG GCGATCAAGC CGCGCGTGGC GTTCGCGGTG GACAACACGC TGTCGGGCGA CGGGCAGCTG ATGGTCGACA TGACGTTCGA AAGCATCGAG GACTTCTCGC CCGCCGCGAT CGCGCGAATG GTCGGCCCGT TGCGGCAATT GCTCGAGGCG CGCACGCAGC TCGCGAACCT GCAGACCTAC ATGGACGGCA AGTCGGGCGC CGAGACGCTC GTCAACCAGT TGCTGCAGGA CCCGGCGCTG CTGCGCTCGC TCGCAGCCGC GCCGAAGCCG CAGCTCGCGG GCGGGCCGGA CGCGGGCAAT GCGCGCGGCG CGAAGGACGC GCCCGACACG GCGAACCACG ACAGCGATGC GGCCTGA
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Protein sequence | MTIRPPPQNN LINENQFNET GRAQSNESDF PDRRAGKLID ALWVFGITIT PIRKGPVHGD LASGAVRETR GYALQGDRIG HGFLQAARQS VRRAGALAAA VVAAVRLRSA PDRAARRHRA RRARSRHRAR ARRAAGRRGL DQRFFPSRRN RDRARMGARD AALRRPAHPR RMARRRARRY AGTAARAAFH FAGVREDSSR RRSRRRAARV DGRFAGSGGR AVRPRRFRAR FAGRAVRRDA RRAERLAARA ILHGPDRARS RRRHRPRHRA RARNPHDDRR ATAAQAEQSA AHRRGGRGQD GRRRGPRARD RERRRAAEAG RRAPDERRRG RAAGRRGHER RIRIAPERRA RGRGEIRRAR HPVRRRDSHA DRRGRTGRHG RRGEPAQARA RARHDPHDRR DDMGGVQAAH RKGSRIDPPL SGAASAGARR AGRGAHGAGR RASVRAAPPR DGARRGDPRR RRAVAPLHSV AASAGQGDQP PRHRMRARRA LAARRARRTA ARAPALARGA RRARSARTGG AHRARRRAIA RGGARTHRSA RGRGSGRRRA LEGAGRRGAR AARRARGRAR GMSPRVLRRN ARRLALRISY RISYRIARQI THRLQRLCSQ RRPGRNARRF AHRNASGHAR RSARRPRLAP ARRRYAARRR RPRAARARTR ARGGPGRRTA RVPGSRRGDR RADRRGLDRH SGRPHDDRRS RRRARAARDA RGARDRPARR AAADRRARAD RARGPRRSEE AARRIPACGP VGRRQDRNGA RARRGAVRRR TEPDHDQHER VPGSPHRVGP QGRAARLCRL RRGRRADRGG AAAAVQRRAA RRDREGAPRR ARTLLPGLRQ GLHGRRRRPL HRFPQHDDPA HEQRRRGTER EPVCRRIARA RCRRAARRAH ARTAEGLPRR VPRARERRAV PAARSARARA HRAPASGSRR RAHGRAAPHR ARVRRRRRRL RRRALPRAGN RRAAADRIHR AARAASAVRA VARRVPVEGG ARAHRHRCGR RGRARGARAR LPARPSKPGG AAERAAHRRA GRLALLSFPS LTESRMSASS SSQKFIARNR APRVQIEYDV EVYGSEKKVE LPFVMGVLAD LSGKPVAPLP AVADRRFLDI DIDNFDERMK AIKPRVAFAV DNTLSGDGQL MVDMTFESIE DFSPAAIARM VGPLRQLLEA RTQLANLQTY MDGKSGAETL VNQLLQDPAL LRSLAAAPKP QLAGGPDAGN ARGAKDAPDT ANHDSDAA
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