| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1596 |
|---|
| Symbol | |
|---|
| ID | 3693563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1945748 |
|---|
| End bp | 1947235 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637731850 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_336753 |
|---|
| Protein GI | 76818382 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4287] PhoPQ-activated pathogenicity-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0977931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAACA AGGTTGCAGG TGCCATTGCC CTGTCTATGT TGTCGCTCGC CTACCCGCGC
GCCGAAGCCG CGCCGATCGC TTTTCCGTGC CCAATCGACG CGCGCCGCGA TTTGACCGAT
ACGCTCGCCT GCTACCGGCA GACGGTGGAA AACCAGCCTT TGAACTACAC GATGACAAGC
ATCGTGCAAC TGCCCGGGAT CGAACAGCGA ACGTACCGGC TTGTTTCGCA ATCGTGGTCG
CCCGATCAGC TCGTGCGCCC TGACACGTGG GTACACGAAG TCGCGCTTTA CATTCCGCAA
GACGCGCTGC CTCGTCGCGC ACTCGTGATC GCCAATGATG GTACGCGGCA CCCAGGCGAA
GGGGAAACGC CGAGGACACC AAACGATTTC CTGCCCGATA CGCTGGCGGA TATCGCCAGA
AGCACGCGCA CCGCGGTCAT TTCGGTGAGC GATGTGCCTA ACCAGCTTTT GTCTTATGCG
GACGACGGCA AGCCGAAAGC GGAGGACGAC AGTGTGGCGC GCAGTTGGAC GCTTTTCATG
CAGTCGCCGC ATACGCGCGG CGCGATGCCT TTGCACGTCC CCATGGCGGC GTCCATCTGG
CGCGCGATGT CGCTCGCGGA GCGCGAACTG ACCTCGCTCG GCATCCATCG CTTCGTCGTC
TCCGGCATTT CGAAACGTGC TTGGACCACC TGGCTTGCGC TGATCGGAGA CCAACGCGTC
GATGCCATCG CGCCCTTCGC GATCGATCTG CTCTCGACAC GAGCCGCGCT CGAGAACATG
TATCGTTCAT ACGGCGGGAA TTGGCCGCTG GCCTTCTATC CGTATTACGC GGAGGGTATC
GACCGAACGC TAGACAGCCC GGCCTTCGGC CTGCTGATGC GTATCGAAGA TCCGCTTTCG
TATCTCGGCA CGCGCCATAG CTCGCGCCTG GCCGTGCCGA AATACATTGT CAACGCAAGC
GGCGACGATT TTTTCGTGCC GGACAATTCG CAACGCTATT TCGACAAGCT TCCCGGTGCG
AAGGCGCTAC GCATGGTGCC CAATTCCTCG CACTCGGACA TTCGCCGCGC CACGCTCGAT
TCTCTCGTCC CGTTCGTCAA GCGCATTCAG CACGGCAAGG CATTGCCGCA GGTGGACGCC
GCGCCGATCG AGACGAACGG CCAGACAATA CTGCGGCTGC GCACGTCGGA GCGGCCCCGG
CAACTGCTGT TGTGGCAAGC GACGAATCCG CTCGCGCGCG ACTTCCGTTA CGCGTGCGGC
ATCCGCTATA CATCGACGCC CATCGCGATG AACGGCGCCC GGCCTCAGCA GTTGGTTCTC
GTGCCGCCGA CGAACGGATG GCGAGCCTAC TTCGTCGAAG CAACATTCGA CGATGGATTC
GTCGCAACGA GCCAAACGTA TATTCTCGGC GACGGCTACC CGAGCACACC GCCGCCGGCA
GTCGGCGGTA GCTGCCGAAC GCTGCCCGGC CGAGACACAC ATTCGTGA
|
|---|
| Protein sequence | MRNKVAGAIA LSMLSLAYPR AEAAPIAFPC PIDARRDLTD TLACYRQTVE NQPLNYTMTS
IVQLPGIEQR TYRLVSQSWS PDQLVRPDTW VHEVALYIPQ DALPRRALVI ANDGTRHPGE
GETPRTPNDF LPDTLADIAR STRTAVISVS DVPNQLLSYA DDGKPKAEDD SVARSWTLFM
QSPHTRGAMP LHVPMAASIW RAMSLAEREL TSLGIHRFVV SGISKRAWTT WLALIGDQRV
DAIAPFAIDL LSTRAALENM YRSYGGNWPL AFYPYYAEGI DRTLDSPAFG LLMRIEDPLS
YLGTRHSSRL AVPKYIVNAS GDDFFVPDNS QRYFDKLPGA KALRMVPNSS HSDIRRATLD
SLVPFVKRIQ HGKALPQVDA APIETNGQTI LRLRTSERPR QLLLWQATNP LARDFRYACG
IRYTSTPIAM NGARPQQLVL VPPTNGWRAY FVEATFDDGF VATSQTYILG DGYPSTPPPA
VGGSCRTLPG RDTHS
|
|---|
| |