Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1499 |
Symbol | |
ID | 3693360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1830868 |
End bp | 1831473 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637731753 |
Product | RNA polymerase sigma factor |
Protein accession | YP_336656 |
Protein GI | 76818237 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000288475 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCACG CGCGCGCCGC GCACGACGAT CCCGCCTATC TCGCGCAATT GCGCCACGAT TTACTTCGCT TCGCGCGTCT GCAACTGCGC GACGCCGATG CGGCCGAAGA CGCCGTCCAG GAGGCGCTCG CGGCGGCATG GGCGCAGGCC GAGCGCTTCG ACGGGCAGTC GAGCCACAAG ACCTGGGTGT TCGGCATCCT GCGCAACAAG CTGATCGATA CGATCCGGGC GCGGCGCAGG ACGATCAACG CGTCGGCGCT CGACGCGGAG CTCGACGGCG AAGCGCTTCT CGAGCGCGAA CTGTTCGTGG ACAATGGGCA CTGGGCGCCG CACGCGAAGC CTCGTCCGTG GCCGAAGCCG GAAACGATCC TGCAGCAGCG GCAGTTCTGG ATACTGTTCG AGACGTGTCT CGAACACCTG CCGGAGCAGA TTGGCCGCGT ATTCATGATG CGCGAGTTTC TCGATTTCGC AATCGACGAC ATTTGCACGG AGCTCGAACT GAAGGCGAAC CATTGCAGCG TGCTGCTGTA CCGCGCACGG ACCCGACTGC GCACCTGTCT CACCGAAAAA GGCTTGACGA CCGAAGATGC TACTGGGGAA ATGTAA
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Protein sequence | MQHARAAHDD PAYLAQLRHD LLRFARLQLR DADAAEDAVQ EALAAAWAQA ERFDGQSSHK TWVFGILRNK LIDTIRARRR TINASALDAE LDGEALLERE LFVDNGHWAP HAKPRPWPKP ETILQQRQFW ILFETCLEHL PEQIGRVFMM REFLDFAIDD ICTELELKAN HCSVLLYRAR TRLRTCLTEK GLTTEDATGE M
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