Gene BURPS1710b_A1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1499 
Symbol 
ID3693360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1830868 
End bp1831473 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID637731753 
ProductRNA polymerase sigma factor 
Protein accessionYP_336656 
Protein GI76818237 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000288475 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCACG CGCGCGCCGC GCACGACGAT CCCGCCTATC TCGCGCAATT GCGCCACGAT 
TTACTTCGCT TCGCGCGTCT GCAACTGCGC GACGCCGATG CGGCCGAAGA CGCCGTCCAG
GAGGCGCTCG CGGCGGCATG GGCGCAGGCC GAGCGCTTCG ACGGGCAGTC GAGCCACAAG
ACCTGGGTGT TCGGCATCCT GCGCAACAAG CTGATCGATA CGATCCGGGC GCGGCGCAGG
ACGATCAACG CGTCGGCGCT CGACGCGGAG CTCGACGGCG AAGCGCTTCT CGAGCGCGAA
CTGTTCGTGG ACAATGGGCA CTGGGCGCCG CACGCGAAGC CTCGTCCGTG GCCGAAGCCG
GAAACGATCC TGCAGCAGCG GCAGTTCTGG ATACTGTTCG AGACGTGTCT CGAACACCTG
CCGGAGCAGA TTGGCCGCGT ATTCATGATG CGCGAGTTTC TCGATTTCGC AATCGACGAC
ATTTGCACGG AGCTCGAACT GAAGGCGAAC CATTGCAGCG TGCTGCTGTA CCGCGCACGG
ACCCGACTGC GCACCTGTCT CACCGAAAAA GGCTTGACGA CCGAAGATGC TACTGGGGAA
ATGTAA
 
Protein sequence
MQHARAAHDD PAYLAQLRHD LLRFARLQLR DADAAEDAVQ EALAAAWAQA ERFDGQSSHK 
TWVFGILRNK LIDTIRARRR TINASALDAE LDGEALLERE LFVDNGHWAP HAKPRPWPKP
ETILQQRQFW ILFETCLEHL PEQIGRVFMM REFLDFAIDD ICTELELKAN HCSVLLYRAR
TRLRTCLTEK GLTTEDATGE M