| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1215 |
|---|
| Symbol | |
|---|
| ID | 3693109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 1525981 |
|---|
| End bp | 1526535 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637731469 |
|---|
| Product | chorismate lyase superfamily protein |
|---|
| Protein accession | YP_336372 |
|---|
| Protein GI | 76817243 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTT CGAGCGGCTG GTCGCGCCAG CCGCCCGCAT CGCTTTCCGA GCTCGAGATC
CACTGGCTCT TCGCGCCGGG CTCGCTGACG GAAAGACTGA GCGCATTGGG CGAATACTCG
CTCGAACCCG TCGATCAACG CCACGCGGCC GCCTGCGCCG CCGACGCGTC GCTGCTCGGC
GTCGAGCCCG ATTCGCCGAT CTGGGTTCGC GAAGTCGTGA TGCGCCTTGA TGCGCAGCCG
TGCGTGACCG CGCGCAGCAT CGCGTCGGCG CACGCGCTCG AAACGCAGTG GAAGCCGCTG
ACGGGCTACG GCAGCCTTCC GCTCGGGCAC ATCCTGTACG ACGATCCCGC GATCGTCCGT
GCGCCGTTCG AGTGCGCGCT GCTGATGCCG GACGATCCGC TCGACGCGAT CTCGCGCCGC
TATGCGCGCG CCGCCGCGCC GCCGCGCGCG CGACGCTCCG CATTCGTGCG CAACGGCGCG
ACGCTCGTCG TCAGCGAATG CTTCCTGCCG CAATTCTGGA GTGGCTTCGC GCAGGCCCGG
CTCGCCGGCG CTTGA
|
|---|
| Protein sequence | MNTSSGWSRQ PPASLSELEI HWLFAPGSLT ERLSALGEYS LEPVDQRHAA ACAADASLLG
VEPDSPIWVR EVVMRLDAQP CVTARSIASA HALETQWKPL TGYGSLPLGH ILYDDPAIVR
APFECALLMP DDPLDAISRR YARAAAPPRA RRSAFVRNGA TLVVSECFLP QFWSGFAQAR
LAGA
|
|---|
| |