Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0940 |
Symbol | |
ID | 3692858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1199047 |
End bp | 1200252 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637731194 |
Product | major facilitator family transporter |
Protein accession | YP_336098 |
Protein GI | 76819626 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.566015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCCGC TCCGATCGAT TCTCCCGTTG GCCCTGTTCA CCGCCGTCGG GCTGCTCGCC ACCGACCTCT ATCTCCCCGC CGTGCCGTCG TTGCCGCAGC AGCTCGGCGG CTCCATCGAA AGCGCGCAGG CGACGCTCGC CGCGTTCTCG GCCGCGCTCG CCGTGTCGCA GCTCGTCTGG GGCGCGGCCG CCGACCGCTT CGGGCACCGC CGCACGCTCG CGTTCGCGGT GCTGCTGCAA CTCGTCGCGG GCGCCGCGTG CGCGCTCGCG CCTTCGATGG GCGCGCTGAT CGGCGCGCGC CTCGCGCAGG GCTTCGGCGT CGGCGCGGCG ATGGTCATCG TCCCCGCGCT CGTGCGACAG TCGTTCGGCG ACGGCGGCGC GGTCCGCGCG CTCGCATGGC TCGGCATCGT CGAAAGCGCG GTGCCCGGAC TCGCGCCCCT CGTCGGCGCG GCGCTGCTCG TCGTGGCCGA CTGGCGAACG AGCTTCTGGA TCATCGTCGC GTTGTCCGCC ATCGCGGCGC CGCTCGTGTT CCGCGTGATT CCGACGGCTC GCGCGATGCG CGCGTGTGCG CCGGCGAACG TCGGCGCACA CGCGGGCGGC TATCGGCGGC TGCTGCGCTC GCCCGTCTAT CTCGGCTACG CGCTCGGCCA CGCGCTCTGC TTCGCCGCGC TGCTCGCGTT CGTCGCGAGC GCGCCGCAAG TCGTCGAGAT CTGGCTCGGC GCGGGGCCGT CGACGTTCAG CCTGATGCAG GCGTGCGGGG TCGCCGCGTT CATGCTGAGC GCCGCGCGCA GCGGCAAATG GTCCGACGCG CTCGGCCTCG ACCGGATCAT CGCACTCGGC GCGCTGCTGC AGTTCGCGGC GTCGGCCGCG TTCCTGCTGC TCGCGTATGC CGATTGGCGC TCGACGCCGC TCGTCGTCGC ATCGTGGATG CTGTTCTGCG GCTCGCTCGG CCTGCGCGGG CCGGCGTCGA TGGCGCGCGC GCTCGCGGCC GAGCCCGCCG TCGCGGGACG CGCGGCCGGG CTGCTGATGT TCTTCGGGCT CGGCGGCGCG GCGCTCGCGA CACAGGCCGT CGCGCCGTTC CTGCGGCTGG GGCTCGCGCC CGTCGCGTGG ATGTGCGCGG GCTTCACGCT CGCGAGCGGC GCGGTCGTGC TGTGGGGCAT CGCGATACGC GGCCGACATC GCGCGGCGGC CACGGAAATC GCGTGA
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Protein sequence | MHPLRSILPL ALFTAVGLLA TDLYLPAVPS LPQQLGGSIE SAQATLAAFS AALAVSQLVW GAAADRFGHR RTLAFAVLLQ LVAGAACALA PSMGALIGAR LAQGFGVGAA MVIVPALVRQ SFGDGGAVRA LAWLGIVESA VPGLAPLVGA ALLVVADWRT SFWIIVALSA IAAPLVFRVI PTARAMRACA PANVGAHAGG YRRLLRSPVY LGYALGHALC FAALLAFVAS APQVVEIWLG AGPSTFSLMQ ACGVAAFMLS AARSGKWSDA LGLDRIIALG ALLQFAASAA FLLLAYADWR STPLVVASWM LFCGSLGLRG PASMARALAA EPAVAGRAAG LLMFFGLGGA ALATQAVAPF LRLGLAPVAW MCAGFTLASG AVVLWGIAIR GRHRAAATEI A
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