Gene BURPS1710b_A0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0684 
Symbol 
ID3693175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp880937 
End bp881614 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content77% 
IMG OID637730938 
Producttype III secretion protein HrpB4 
Protein accessionYP_335843 
Protein GI76818090 
COG category 
COG ID 
TIGRFAM ID[TIGR02560] type III secretion protein HrpB4 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.12589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGCG GCGCGCCGGT GGCGAGCGTC GAGGCCCGGG CCGCGTGGCT CGTGGGCTAC 
GACGCGAACG CGCGACGCGC GGCGGACTGG GTCCACGCGA GCTGGCACGG CGCGCTCGCG
CCGCTCGTCG CGGCAATGCA TGAGCATGCG CCCGCGCTGC GCGCCGCATG CTCGCTGCTG
CTGCTGCGCA CGCTCGGGGG CTCCGCGCCG ACGCTCGGCG GATTCGACGC GCGCGCCGAC
CGTCTCGCCG CGCTGCCCAT CGCCGATACG CTGCGGCTGT TGCGCATGCG CGCGCTGCTG
TTCCGGCGCA CCGAGCTGCG CCACTGGATC GACCGCGCGA GCCGCGAGCG GCTTGCCGGC
TGGGTCGGCG CCGACGGCGG CCGCGCGCTC GCCGCGCTCT GCGCGCAGCC CGACGCGCGG
CGCGAGCGCG AGCGCCGCGA GCCGCTCGCG CCGCTCGCGC AACTGTCCGC CGACGATATC
GCGTGGGAAG GCTGGTGCCT GTTCGAGCGC GAGCGGGTGT GGTCGCCGGC GGGCCCGATG
CGCATCGTGC GTCTCGCGCT GCCGCGCGAG CCCGCGCGCG CGCCGTGGCT CGAGCGCGCG
GCGGCGGACG CGGACGGCGC GATGCTGCTC GCGCGCGTGC CGTCGCTGTT TCCGGAGTGG
ACATGGCTTT TTGGCTGA
 
Protein sequence
MTGGAPVASV EARAAWLVGY DANARRAADW VHASWHGALA PLVAAMHEHA PALRAACSLL 
LLRTLGGSAP TLGGFDARAD RLAALPIADT LRLLRMRALL FRRTELRHWI DRASRERLAG
WVGADGGRAL AALCAQPDAR RERERREPLA PLAQLSADDI AWEGWCLFER ERVWSPAGPM
RIVRLALPRE PARAPWLERA AADADGAMLL ARVPSLFPEW TWLFG