Gene BURPS1710b_A0684 details

Gene Information

• Locus tag: BURPS1710b_A0684
• ID: 3693175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 880937
• End bp: 881614
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 637730938
• Product: type III secretion protein HrpB4
• Protein accession: YP_335843
• Protein GI: 76818090
• TIGRFAM ID: [TIGR02560] type III secretion protein HrpB4

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.12589
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGGCG GCGCGCCGGT GGCGAGCGTC GAGGCCCGGG CCGCGTGGCT CGTGGGCTAC 
GACGCGAACG CGCGACGCGC GGCGGACTGG GTCCACGCGA GCTGGCACGG CGCGCTCGCG 
CCGCTCGTCG CGGCAATGCA TGAGCATGCG CCCGCGCTGC GCGCCGCATG CTCGCTGCTG 
CTGCTGCGCA CGCTCGGGGG CTCCGCGCCG ACGCTCGGCG GATTCGACGC GCGCGCCGAC 
CGTCTCGCCG CGCTGCCCAT CGCCGATACG CTGCGGCTGT TGCGCATGCG CGCGCTGCTG 
TTCCGGCGCA CCGAGCTGCG CCACTGGATC GACCGCGCGA GCCGCGAGCG GCTTGCCGGC 
TGGGTCGGCG CCGACGGCGG CCGCGCGCTC GCCGCGCTCT GCGCGCAGCC CGACGCGCGG 
CGCGAGCGCG AGCGCCGCGA GCCGCTCGCG CCGCTCGCGC AACTGTCCGC CGACGATATC 
GCGTGGGAAG GCTGGTGCCT GTTCGAGCGC GAGCGGGTGT GGTCGCCGGC GGGCCCGATG 
CGCATCGTGC GTCTCGCGCT GCCGCGCGAG CCCGCGCGCG CGCCGTGGCT CGAGCGCGCG 
GCGGCGGACG CGGACGGCGC GATGCTGCTC GCGCGCGTGC CGTCGCTGTT TCCGGAGTGG 
ACATGGCTTT TTGGCTGA 

 

Protein sequence

MTGGAPVASV EARAAWLVGY DANARRAADW VHASWHGALA PLVAAMHEHA PALRAACSLL 
LLRTLGGSAP TLGGFDARAD RLAALPIADT LRLLRMRALL FRRTELRHWI DRASRERLAG 
WVGADGGRAL AALCAQPDAR RERERREPLA PLAQLSADDI AWEGWCLFER ERVWSPAGPM 
RIVRLALPRE PARAPWLERA AADADGAMLL ARVPSLFPEW TWLFG