| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0659 |
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| Symbol | hrcC |
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| ID | 3694288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 860130 |
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| End bp | 861920 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 637730913 |
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| Product | type II/III secretion system family protein |
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| Protein accession | YP_335818 |
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| Protein GI | 76817874 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCGGC GCGCGGCCGC ATCGGCTGCC GCCGTCGCGC TCGCGCTCGC GAGCCATGCG
GCGGCGCTGC GGGCGGTGCC GCTCGCGTGG CCGCTCGCGC GTTTCGACTA TCGCGTCGGC
CCGGTGAACG CCGCCGATGC ATTGGGCGAG CTGAGCCGCC GCTCGGGCAT CGCCATCGAC
GTCGACGCGC GCGCGCCGTG CCGGCTCGAC GTGCGCGAGG CGCTGCCGCC GCGGCGCTTC
GTCGAGCGGC TCGCGCGCAC CTGCGGGCTC GTGTCGTACT ACGACGGCGC GGTGTTGCAG
CTCGTCGCGC CCGACGCGTT CGAGCACGCG GCGGTGCGGC TCAATTACGC GACGCTCGCC
GAGCTGCGCG CGGCGCTCGC GCGGCAGCGG ATCGTCGACG CGCGCTGGCG GCCCGGCTAT
GACGACGCGG CGCGGATCGC GCGCGTCGCC GGCCCGCCGC GCTATGTCGC GCTCGTGCTT
GCCGCCGCGC GCGCGCTCGA CGAGGCCGCG CAGACGCGCG TGCGCACCGA GACGCGCGCG
TTCCGGCTGC GCGCGCGCGC GGCGGCCGAC CGCGTCGTGC GCGGCGATGG CGACGGCGAC
GATGCGGTGC TGCCCGGGCT CGCGACGCGA CTGCGCCGCC GGCTCGAGCA GGACGGCGCC
GCGCCGCGCG CGGTGCCGGG CGTGCGCGAA TTCACCGCAT CGTTGCCGAT CGTCGACGCG
GACGCACGCT CGAACACCGT GCTGATCCGC GACGTGCCCG CACGGCTCGC GCACGACGCG
CGGCTCGTCG CGCAGCTCGA TACGCGGCCC GCGTCGATCC GGATCGACGC GTTCGGCGCA
ACGCTCGCGC CCGCGCAGCT CGACGCGCTC GGGCTGCGAT GGCGCGACGG CGCGCCGGCT
TCGGGCGCGT CGCGCGATGC GGGCGTCGCG CGCGACGGTT CGCGTGCGTC GGCGGGCGGC
CGGCTCGTGG GCGCGTCCCG CCCGTCCGGC GCGCGGAACG AGGCGGCCGC GGCGGGGGCG
CGGCGTGCGC CCGTGGTGTC CGCCGCACCC GACGCGTCGG GCGCATCCGC CGCATCCGGC
CCATCCGCCG CCTCAGGCGC TCCCGACGCC GTCGACGCAT CCGCCGGCTC GGCCGACTCT
CCCCGCGCAT CCGCGGTGCG CATCGCGATC GTGTCCACGC CTGCCGGCTG CGCGCCGGTG
CGCGCGCGCA TCGCCGAGCT TGCCGCGCAC GGCGACGCGT CGATCGACGC CGACGACTCG
ACGCTGGCGC TTCCCGATAG CCGCGCGGAT TTCGGCCGGC TGCGGCTGTC GTTCGTCGCG
TCGGGCGATG GCGACGCGCG CGCGCTCGAT GCGCGGCGCA ACGGTTTCGC GATGCGGGTC
ACGCCGCACG AGACCGCGCA GCCGGCGCGC TACGCGCTCG ACATACGGAT CGTCGAGCGT
CGGGCCGACG GCGACGCGGC CGGCGCGTCG TCGCGCGAAA CCGTGGCCGG CGTGATGCTC
GCGGCGGGCG AGTGCGCGGC GCTCGCGCTG CCGTCGGCCG CGCACGGCGA GCAGCGGCTC
GTGCTGGTGA TGCCGCGAGC GGTGCCGGCC GATCCGGCGC GCTTGCCGCC GCAGGCCTCG
CCGAACGCGC CGGCGGCCGC GGCCGTCGCC GCCAACGCAC GGGGGCCCGA CGCCGCCGAG
CCCGCGGCGC GCGCGCAGGC GGCCGCGCGC GCGCATCCGC CGGCGGCGCC GCTGCCTTCG
CCGTCCGCCG GCCTCGGCTT GCGGGCGCAG ACCCGCCTGC TCGGCAATTG A
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| Protein sequence | MTRRAAASAA AVALALASHA AALRAVPLAW PLARFDYRVG PVNAADALGE LSRRSGIAID
VDARAPCRLD VREALPPRRF VERLARTCGL VSYYDGAVLQ LVAPDAFEHA AVRLNYATLA
ELRAALARQR IVDARWRPGY DDAARIARVA GPPRYVALVL AAARALDEAA QTRVRTETRA
FRLRARAAAD RVVRGDGDGD DAVLPGLATR LRRRLEQDGA APRAVPGVRE FTASLPIVDA
DARSNTVLIR DVPARLAHDA RLVAQLDTRP ASIRIDAFGA TLAPAQLDAL GLRWRDGAPA
SGASRDAGVA RDGSRASAGG RLVGASRPSG ARNEAAAAGA RRAPVVSAAP DASGASAASG
PSAASGAPDA VDASAGSADS PRASAVRIAI VSTPAGCAPV RARIAELAAH GDASIDADDS
TLALPDSRAD FGRLRLSFVA SGDGDARALD ARRNGFAMRV TPHETAQPAR YALDIRIVER
RADGDAAGAS SRETVAGVML AAGECAALAL PSAAHGEQRL VLVMPRAVPA DPARLPPQAS
PNAPAAAAVA ANARGPDAAE PAARAQAAAR AHPPAAPLPS PSAGLGLRAQ TRLLGN
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