Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0578 |
Symbol | |
ID | 3694319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 770793 |
End bp | 771752 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637730832 |
Product | type III secretion system apparatus protein YscQ/HrcQ |
Protein accession | YP_335737 |
Protein GI | 76818002 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.194369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCGC GCTATACGTT GTTCAGGCGC GTCGCGCCCG CGGAATTGCC GCTGTACCGC CGTGCGCGGG CGCTGCGCGC GGCGGGCGAG CACGCCGCGC TGCGCACGAT CGCGCCGCCG CGCGGCTATG CGGCGCTGCG CGCGACGTGG CGGGGCGTCG AGCACGACGG TTGGGTCGAC CTCGACGATC TGATGCGCCG CCGCTACCCG GCGCTCGGCG CGCTCGCGTG GCGCGCGCTC GACAGGCGCT ACGCGCTCGA TTTGCTGAGC GGGCGGGACG CGGCGGCCGA GCTGCCCGCG CCGCCCGGCG GCTGGGCGCA TGTGCGGCTC GTCGATCTCG TCGAGCGCGC GCTGCCCGCC GAGCCGCTGC TGTGTTTCGA CACCCCGGGC CGCGCGCGTG CGCTGTTCCG CGCGTTCCCG GACGAAGCGC CCGCGGCGTG CGCCGTGGCC GACATCGGCG GCGTGCCGCT CACGATGCGC TTCGCGATCG GCACCGCGCG CCTGCCGCTC GCGCTGTTGC CCGCCGTCGC GCCGGGCGAC GTGCTGCTCG TATGCGCGCC GCGCAACGTG GTCCGCATCG GGGCGCGCGC ACTGTGTGAA TTTTGCTGCG AAGGAGAAAA CATCATGCTG AACGAACCCC TGGCCGACTC CGCGATCGAC GCCCTGCACG ACGCATCGCA CGACGAACCG ACGGCGGCGC ACGCGCCGCC GGCTTTCGAC ATCGATGCGC TGCCCGTCAC GCTGGAGTTC GTGCTGCACG ACGAACGCGT GACGGTCGCG CAGCTCGCGG GCTGCCACCC GGGCATGGTG CTGCCGCTGC GCGGTGCGCC GGGCGAGGTG ACGATCCGCG CGAACGGCCA GCCGTTCGGC CGCGGCGAGC TGATCCAGGT CGGCGAGCAG CTCGCGGTCG AGGTGAAGGC GCTCTGGCGC GCGAAGCCGG CGGCGTGCGA TGGCGAATAA
|
Protein sequence | MSARYTLFRR VAPAELPLYR RARALRAAGE HAALRTIAPP RGYAALRATW RGVEHDGWVD LDDLMRRRYP ALGALAWRAL DRRYALDLLS GRDAAAELPA PPGGWAHVRL VDLVERALPA EPLLCFDTPG RARALFRAFP DEAPAACAVA DIGGVPLTMR FAIGTARLPL ALLPAVAPGD VLLVCAPRNV VRIGARALCE FCCEGENIML NEPLADSAID ALHDASHDEP TAAHAPPAFD IDALPVTLEF VLHDERVTVA QLAGCHPGMV LPLRGAPGEV TIRANGQPFG RGELIQVGEQ LAVEVKALWR AKPAACDGE
|
| |