Gene BURPS1710b_A0479 details

Gene Information

• Locus tag: BURPS1710b_A0479
• Symbol: nspC
• ID: 3692017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 661934
• End bp: 665164
• Gene Length: 3231 bp
• Protein Length: 1076 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637730733
• Product: Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase
• Protein accession: YP_335638
• Protein GI: 76818456
• COG category: [E] Amino acid transport and metabolism; [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG0019] Diaminopimelate decarboxylase; [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
• TIGRFAM ID: [TIGR01047] carboxynorspermidine decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.303637
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGCGC ATTTCGACCA TGCCGCCGCG CGCTACGCGG CACGAACCGG CGAGCCGTTG 
ACGCTCGACC ACGCGCGCGC GTTCTGCGCG GCGACGATGC TGCGCGCGGT CGAACACCCC 
GCCGGAACCG ACGACTGGCA TCTCCTTTGC CGATTGGACG AGATACCGGA CATCGGCGAC 
TACGTCACGG GCTACGCGTT TCAGGAAAGC ATGACGGCGG TCCGCGCGAG CGAGCACGAG 
GTCCGCGTGT TCCTGAACGT CTGCCCTCAT CGGCAGACGC AGCTCTTTCA GGCCGCCGGC 
TCGTTCGATC CGCATCGGCA CGTTCGATGT CCGTATCACG GCTGGACCTT CGACGTCGAC 
GGGCGCTGCG TGAACGCGCC GGGCGCGCGA CGCTGCGAGT TCGGCGCGGA CTTCCGCGAG 
CAGGATTTTT CCCTGTCGCG CGTGCCGGCT CGCATCGAGG ACGGCGGCAT CCTCGTGCGC 
AAGGCGGTCT CGCGCGTCGG CCGCCGCATG GCGGCGCTGT ACGAGCGCGT GTATTTCGCG 
TTCCCCGACG TCAAGCGCCC ATTCGTGCCG GACCGCTTTC GCGTGCTGCT GCGCATCGGC 
TTTCTCGCGG CCGACATCCG GCACGCGCGC GATTCGTCGA TCCTGTCGGC GCTTCGCGCC 
GAACTGCGTC AGCACCTGCT GACCTATCCG GACCTGCCGG TGCGCTACGC GTCGCTCGCG 
AAACGACATG GCGAGCCGAC GGTCGATGCG GTCGATGCGG TCGATGCGGT CGATGCGGTC 
GATGCGGTCG ATGCGGTCAA TGCGGTCGAT GCCGTCGATG CCGTCGACCT CGGCCCCCGG 
CTCGCGGGCG GCCCGCTGCG CGAGACCGTG GCCACCTGGG TCTACGGCGA CGCGGAGTTG 
CACGCGCTCG AACGGGACAC GCTCGTGCTG CCCGCGTGGC ACTTCGTCGG CCACGTCGCG 
GAACTTCGCG GCGGCGAGCG CACGTTGACG CTCGACGTGT CGGGCGAGCG CGCATACGTC 
TGCCGAGCGC GCGACGGCAC GATCCATGCG GGCCGCCTCG TCGACATCGA CCGTCGCACC 
GACGACCCGG CACGGCTGCG CGCGGACGGC GCGCTCGCGC CGATCGACGT CGATGTCTGG 
CAGGGGCTGA TATTCGTGCG CCTCGCGGCC GGCCGGGGCG GGGTCGCCGA TATCTGGGAG 
CATGCGCGGA TGCTCGAGCC ATACCGGATC GGGCAGATGG CGCCGCTCGC CGGCAAGGGC 
TGGTACGACT TCGCCGTCGA AGCGGACGCG AAGATTCTCT GGGAAAACTT CCTCGAGATG 
TACCACTTCC CGGCGGCGCA CCAGGCGATG ATCCGCTTGT TCGAGCTGTC GAGCCGCTCC 
GATCTGCTGA CGCTGCGCGA ACCGGCCTCG ACGCGGCTGT CGCCCATCGA GGCGCGCTAC 
CGCGACGCAT TGAAACGCGG CGCGACACAC GGCGCGGACG AGGAAGCGCG GCAACGCGCG 
ATGGCCGATG GCGACGCCGC CCTCGCGCGC CCGCTCCAGC TGACCGTGTT CGGCTCGATT 
CCCGAAACGG CGCAAACCGC GACGATGCTC GGCATCACGG TCTTTCCCGA TCACATTCAG 
GCGATGTCGT TCATTCCGGT CGGCCCGCGG GAATGCCGCG TGAAGATCCG CAGCTACGGC 
CATGCCGCGG AAGGCGCGCT CGACATCGCA CGGCAGTGCA ACGTCGAGCA GTTGCAGATC 
GAGCTCGTCG AGGAAGACAT TCAGTTGAAC CATCGAAGCC AGATCGCGGC ATCGACGCGC 
AGTTACGAGC GGCGCGGCGT GCTGCACGAC ATGGAAGTGA GCGTCGCCGA TTTCCAGCAA 
TTGCTGCGGC GCGTCCTGCC CGTCACACGC TGCGTCCGGC GCCCGCCCGT CGGCGCGCTC 
GCGCGCGCGA ATCAAGCGCT CAGGCTGCGC GATCGCGACG AGCGCGGCGC GCCTCGCCGC 
GCCTGCGCGG ATGCGGCACG CCGCGCCCGC GCCCCCGCCG CCGCATCGGC CTTTGCCGCG 
CCGCCGCCTG TTTCTCGGCA ACGCAATGCC GAGACGCTCG AAGCACTCGA TACGCCCGCG 
TTCGTCTACG ACGAACGCAC GCTGCGCGAC GCATTGTCTT CGATGCACAC GCTGCTCGGC 
GACAGCGGCT GCCGCCTGCT GTATCCGCTC AAGCCGTTTT CGCACGCGGG CGCGCTCGAA 
TGCATCGGGC CGCATGTCGA CGGCTTCGCC GCGTCGTCGC CGTTCGAGGC CGCGTTCTCG 
CGCATGCTTC TCGGCCGCGC GGGCTCGGTC CACCTCGCGA CGCCGGCGCT GCGCGACCGC 
GACCTCGGGA CGATCGTCGA CAACTGCGAC TACGTCGCGC TGAACTCGCT GTCGCAATGG 
CGGCGCCTGC ACGATGCATT GGCGGGCCGC CTGTCGTGCG GCTTGCGGAT CAATCCGCAA 
TATTCGGTCG TGGCCGACGC GCGCTACGAT CCGTGCCGGC CGCATTCGAA GCTCGGCGTG 
CCGCTCGACG CCATCGAGCG CGTCGTCGCG AGCGATCCGC GCGCGCTGCA CGGCCTGCAG 
GGCATTCATT TCCACACGAA TTGCGACTCC ACCGATTTCA GCCGGCTCGC CGAAACGATC 
GAGCACCTCG AAAAGCGGCT CGCGCGCACG CTCGACGGCC TCGCCTGGAT CAATCTGGGC 
GGCGGCTACA TCGCGGACGG CGCGCGATAC GTCGACCGGT TCCGCGCGTG CGCGAAGCGG 
CTGCGCGAGC ATTTCGGCGT CGCGCTGTTC ATCGAGCCGG GCGCGGCGAT CGTGCGCGCG 
GCCGGAACGA TCATCGCCTC CGTCGTCGAC CTGTTCGACA GCGGCGGCAT GCCGATCGCC 
GTGCTCGACA CGACGGTCAA TCACTATCCC GAGGTATTCG AATACCAGTT TCAGCCGGAT 
GTCGACGGGC ATCACCCGGC GCACGCGCAC GCCTACCTGC TGGCCGGCGC TTCGTGCCTC 
GCCGGGGACG TGTTCGGCAC CTACCGCTTC GACGCGCCGT TGAGGGTGGG CTCGCGGGTC 
GCGTTCGTGA ACGCGGGCGC CTACACGCTC GTGAAGGCGC ATCGCTTCAA CGGCATCAAC 
CTGCCGAGCG TCTATCGCAG GGGCGAGGAC GGCGCGCTCG CCGCGGTCCA GCGGTTTTCC 
TACGAAGATT TTCTTCGCCA AAACGGGGGG CTCGACCATG CATATCCATG A 

 

Protein sequence

MHAHFDHAAA RYAARTGEPL TLDHARAFCA ATMLRAVEHP AGTDDWHLLC RLDEIPDIGD 
YVTGYAFQES MTAVRASEHE VRVFLNVCPH RQTQLFQAAG SFDPHRHVRC PYHGWTFDVD 
GRCVNAPGAR RCEFGADFRE QDFSLSRVPA RIEDGGILVR KAVSRVGRRM AALYERVYFA 
FPDVKRPFVP DRFRVLLRIG FLAADIRHAR DSSILSALRA ELRQHLLTYP DLPVRYASLA 
KRHGEPTVDA VDAVDAVDAV DAVDAVNAVD AVDAVDLGPR LAGGPLRETV ATWVYGDAEL 
HALERDTLVL PAWHFVGHVA ELRGGERTLT LDVSGERAYV CRARDGTIHA GRLVDIDRRT 
DDPARLRADG ALAPIDVDVW QGLIFVRLAA GRGGVADIWE HARMLEPYRI GQMAPLAGKG 
WYDFAVEADA KILWENFLEM YHFPAAHQAM IRLFELSSRS DLLTLREPAS TRLSPIEARY 
RDALKRGATH GADEEARQRA MADGDAALAR PLQLTVFGSI PETAQTATML GITVFPDHIQ 
AMSFIPVGPR ECRVKIRSYG HAAEGALDIA RQCNVEQLQI ELVEEDIQLN HRSQIAASTR 
SYERRGVLHD MEVSVADFQQ LLRRVLPVTR CVRRPPVGAL ARANQALRLR DRDERGAPRR 
ACADAARRAR APAAASAFAA PPPVSRQRNA ETLEALDTPA FVYDERTLRD ALSSMHTLLG 
DSGCRLLYPL KPFSHAGALE CIGPHVDGFA ASSPFEAAFS RMLLGRAGSV HLATPALRDR 
DLGTIVDNCD YVALNSLSQW RRLHDALAGR LSCGLRINPQ YSVVADARYD PCRPHSKLGV 
PLDAIERVVA SDPRALHGLQ GIHFHTNCDS TDFSRLAETI EHLEKRLART LDGLAWINLG 
GGYIADGARY VDRFRACAKR LREHFGVALF IEPGAAIVRA AGTIIASVVD LFDSGGMPIA 
VLDTTVNHYP EVFEYQFQPD VDGHHPAHAH AYLLAGASCL AGDVFGTYRF DAPLRVGSRV 
AFVNAGAYTL VKAHRFNGIN LPSVYRRGED GALAAVQRFS YEDFLRQNGG LDHAYP