Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0431 |
Symbol | sctS |
ID | 3694330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 599693 |
End bp | 599956 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637730685 |
Product | type III secretion inner membrane protein SctS |
Protein accession | YP_335590 |
Protein GI | 76818013 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4794] Type III secretory pathway, component EscS |
TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0732733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCG ACTCGCTGAT CCGTTTCTGC ACGCAGGCCA TGCTGCTCTG CCTGAGCGTC TCGCTGCCGC CCGTGATCGT GGCGGCTCTG GTCGGGCTTG GCGTATCGTT CGTGCAGGCG ATCACGTCGC TGCAGGATCA GACCTTGCCG CAAGTGCTCA AGCTGATCGC GGTCACGATC ACGATCATGG TTGCCGCGCC GACCGGCTGT GCGGCGATCC TGCATTTCGC GAATCAGATG ATGCAGCTTG CCGTCCCGCA ATGA
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Protein sequence | MEIDSLIRFC TQAMLLCLSV SLPPVIVAAL VGLGVSFVQA ITSLQDQTLP QVLKLIAVTI TIMVAAPTGC AAILHFANQM MQLAVPQ
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