Gene BURPS1710b_A0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0431 
SymbolsctS 
ID3694330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp599693 
End bp599956 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content62% 
IMG OID637730685 
Producttype III secretion inner membrane protein SctS 
Protein accessionYP_335590 
Protein GI76818013 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4794] Type III secretory pathway, component EscS 
TIGRFAM ID[TIGR01403] type III secretion protein, HrpO family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0732733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCG ACTCGCTGAT CCGTTTCTGC ACGCAGGCCA TGCTGCTCTG CCTGAGCGTC 
TCGCTGCCGC CCGTGATCGT GGCGGCTCTG GTCGGGCTTG GCGTATCGTT CGTGCAGGCG
ATCACGTCGC TGCAGGATCA GACCTTGCCG CAAGTGCTCA AGCTGATCGC GGTCACGATC
ACGATCATGG TTGCCGCGCC GACCGGCTGT GCGGCGATCC TGCATTTCGC GAATCAGATG
ATGCAGCTTG CCGTCCCGCA ATGA
 
Protein sequence
MEIDSLIRFC TQAMLLCLSV SLPPVIVAAL VGLGVSFVQA ITSLQDQTLP QVLKLIAVTI 
TIMVAAPTGC AAILHFANQM MQLAVPQ