Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3671 |
Symbol | sspB |
ID | 3691007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 4018347 |
End bp | 4018874 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637730126 |
Product | ClpXP protease specificity-enhancing factor |
Protein accession | YP_335035 |
Protein GI | 76809975 |
COG category | [R] General function prediction only |
COG ID | [COG2969] Stringent starvation protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.240699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATGC AAGAGATTTC CACGAAGCCG TATTTGCTGC GCGCGCTGTA CGAATGGTGC ACGGATAACG GATACACACC CCATATCGCG GTGCGGGTCG ACAAGTCGAC GCGCGTGCCG CGCCAGTTCG TGCGCGATGG GGAGATCGTG TTGAACATCA GCTTCGAGGC GACGAGCCAG CTGCAGATGG GCAACGAATG GATCGAGTTC ACCGCGCGGT TTTCGGGCAA GGCGCACAAG CTCGAGGTGC CGGTTGCGAA CGTGCTTGCG ATCTACGCAC GGGAGAACGG CCAGGGGATG GCGTTTCAGG TCGACGTTGC CGCGGAGACG GGCGAGGCTG ACGGTAGCGA CGCGCTTGCT GTGGCAGAGG AAGGGGACGA TGCGGGCGCG CGCCACGCTT CAGCCGACGG CGCAGCCGAG GCGGCGCCCG AGCCCGGTGA CGCTGCGGAG GAGTTGCCGA AGTCCGATGG CGATGGCGAC GGTGATGGGG CGAAAGGCAG CCGGCCTCGC CTCAAGATCG TGAAATGA
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Protein sequence | MAMQEISTKP YLLRALYEWC TDNGYTPHIA VRVDKSTRVP RQFVRDGEIV LNISFEATSQ LQMGNEWIEF TARFSGKAHK LEVPVANVLA IYARENGQGM AFQVDVAAET GEADGSDALA VAEEGDDAGA RHASADGAAE AAPEPGDAAE ELPKSDGDGD GDGAKGSRPR LKIVK
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