| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3243 |
|---|
| Symbol | pilE1 |
|---|
| ID | 3691821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 3552028 |
|---|
| End bp | 3552480 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637729698 |
|---|
| Product | fimbrial protein pilin |
|---|
| Protein accession | YP_334615 |
|---|
| Protein GI | 76808790 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATGTA CGGGGCGCAA TTCGCCCTCG AGAGGCTTCA CCTTAATCGA GGTGGTCGTC
GCGATCGCGA TCGTGGCGGT GCTCGCGGCG TTTGCCGTGC CGTCGTATCG CAGTTATGTC
GAACGGGTGA ACCGATTGAC CGCGGTTGCC GCGCTCTATC GCGCCGCGCA ATACGTGGAC
GCGTTCGGCG ACGCGCCGCC CACCGCGTTG CCGGAAGGGG TGAACAGGGC GCCCGAATCC
GGCAAGCTCG TCTATGTGCT GCGGATCATG TTCGACGACG CGCGCGGCGG ATACGCACTG
GAGGCGCGTC CCGCCGCCGA TGGTGCAATG CGGGACGACA GATGCGGCGT CTACGTGCTG
CATGCGGACG GCACGCGCGA GAATCGCGTG GCCGGAGGCG TCGCGCTCGA TGGCGGTGCG
GCGGAGGGCG ATGCCTGCTG GCGAACAGGC TAG
|
|---|
| Protein sequence | MPCTGRNSPS RGFTLIEVVV AIAIVAVLAA FAVPSYRSYV ERVNRLTAVA ALYRAAQYVD
AFGDAPPTAL PEGVNRAPES GKLVYVLRIM FDDARGGYAL EARPAADGAM RDDRCGVYVL
HADGTRENRV AGGVALDGGA AEGDACWRTG
|
|---|
| |