| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3219 |
|---|
| Symbol | |
|---|
| ID | 3688692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 3529645 |
|---|
| End bp | 3530859 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637729674 |
|---|
| Product | alanine--glyoxylate aminotransferase |
|---|
| Protein accession | YP_334591 |
|---|
| Protein GI | 76811828 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000141381 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGA CCGATCACTC GCCCATTCCC TGTCCCGTCG TCGTTCCGCT CGACGCGATC
CTGCCCGAAG AACCGCTGCT CATGATGGGC GCCGGCCCCG TGCCGATTCC CGCCGCGGTC
GCGAAGGCGA ACACGATCGT GATCAACCAC CTGGGCGCGA CGATGGCGAA GATCATCGAG
CAGGTGAAGG AAATGGCCCG CTACGTGTTC CAGACGCGCA CGAAGTGGGT GCTGGGCGTC
GCGGGGCCGG GCTCCGCCGC GATGGAGATG GCCGTCTCGA ATCTCGCGTG GGCCGGCACG
AAGGTGCTGT CGATCAAGAA CGGTTTCTTC AGCGCGCGGA TGGCCGAGAT GGCGATGCGC
GTCGGCGCGG ACGTCGCGAC GATCGACGTG CCCGACCGTT CGGTCGCGAG CCTCGACGAA
ATCGCCGACG CGATCGCGCG CGAGCGTCCC GAGATCGTCA CGATCGTTCA TGGCGAGACG
TCGAACACCG TGTGGAATCG CCATCTGAAG GAGATCGCCG CGATCGCGAA GGCGGCGGGC
GCGCTCGTCG TCGTCGACGC GGTCTGCACG CTGTCGACGA TGCCGCTCGA CATGGACGCG
TGGGGGATCG ACGCGGTGAT CACGGGCGGG CAAAAGGGGC TGTCGTCGAT TCCGGGCGTG
TCGCTGATCG CGTTTTCCGA TCAGGCGTGG GAGCGGATGA AGAGCCGCCC GGAGCCGAAC
ACGCACTGGT GCCTCGACAT GGCGCTCGCC GAGAACTTCT GGCACAACGC CGGCTATCAC
TACACGGCGC CCGTCTCCGG CGTGCTCGCG CTGCACGAGG CGCTGCGGCT CGTCTGCGCG
GAGACGCTCG AGAACCGCTA CGCGCGGCAT CTGCGCTGCT CGCTCGCGCT GCAGGCCGGA
ATCACCGGGA TGGGGCTCGA GCTCTACGCC CCCGAAGCGT GCCGGCTGAA CTCGGTCGTC
GGCATCGCGG CGCCGCGAGG GCTCACGCCG GGGCTCATCT GCGGGCATAT CTCGAAGCAG
TACCAGGTCG AGATCTCGGG CTCGTTCGGG CTGCCGATCG TGCGGATCGG CCAGATGGGC
GAGCAGTGCC GCGAGCACAA CCTGTTCCGC ACGCTGCACG CGTTCGGCCG CACGATGGTC
GACCTGAAGG TGGCGGTCGA TCTGCCGGCC GGCGTCGCCG CGCTCGAGCA GGCGCTGTCG
GGGCGCGCCG CTTGA
|
|---|
| Protein sequence | MSTTDHSPIP CPVVVPLDAI LPEEPLLMMG AGPVPIPAAV AKANTIVINH LGATMAKIIE
QVKEMARYVF QTRTKWVLGV AGPGSAAMEM AVSNLAWAGT KVLSIKNGFF SARMAEMAMR
VGADVATIDV PDRSVASLDE IADAIARERP EIVTIVHGET SNTVWNRHLK EIAAIAKAAG
ALVVVDAVCT LSTMPLDMDA WGIDAVITGG QKGLSSIPGV SLIAFSDQAW ERMKSRPEPN
THWCLDMALA ENFWHNAGYH YTAPVSGVLA LHEALRLVCA ETLENRYARH LRCSLALQAG
ITGMGLELYA PEACRLNSVV GIAAPRGLTP GLICGHISKQ YQVEISGSFG LPIVRIGQMG
EQCREHNLFR TLHAFGRTMV DLKVAVDLPA GVAALEQALS GRAA
|
|---|
| |