Gene BURPS1710b_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3193 
SymbolrhtB 
ID3690491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3499756 
End bp3500670 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID637729648 
Productamino acid transporter LysE 
Protein accessionYP_334565 
Protein GI76809847 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.270395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCCGCA CGCGCGACGT CGCGCCAATC GGCGGCCTCG CGCGCGGCCC GGCCGCCGCC 
GCATGCCCGC TCCCGCCCCG CCATCTTTCG GTTGCCCAGC ACCGCGGTCG TGCCTTAAGC
TCGCCTGAAC GGCCGTTTCA TCTGCGGATT GCGCCGCGCG CCCTACGTGT CGCGCGGCGC
GGGTTCGATT TCCGCCGGCG TCGACGCATC ACCGCCGACG CGAGCCAATG CCGTTTCCGG
CCGTCGCTCA GCGACGGCGG CCGGCCGCGT TTCCTCGACG AGCGATTCCC CATGACGGTC
AACCCCACTC TCGCCTTCAT CGCGACGTGC ATCGGCTTCG GCTTCATTCC GGGCCCGGCG
CTGCTGCAAA CCGTTTCGCT GACGTTGCAG CACGGCCGGC GCGCGGGCGT GCTTTCGGCG
CTCGGCATCC ACCTCGGCGC GTTCTTCCAG ATCTGCTCGG TCGCGATCGG CGCGGTGGTC
GTGCTCGACA CGTCGCCGTG GCTCTATCAC GCGCTGCGCA TCGCGGGCGG CGGGTATCTG
ATCTGGCTCG GCATCCAACG CATCCGCACG CGCGAGGCGA ACGACGGCGG CGACGGCGCG
CCGTCGACGG TGCCGAAGAA CGTGATCTCG GCGAGCGCGC TCATCGAGGC GTCGAATCCG
AAATCGGCGC TGTTCTATCT GTCGTTCCTG CTGCAGTTCG TCGATCCGTC CGCTTCGCTC
GATGTCGGCT GGCAGCTCTT CCTGCTCGGC GCGGGTGCAA ACCTGCTGTT CTCGCTCGCC
GATCTGACCT GCATCGCGCT CGCGCATCCG CTGCGCAAGC GCGCGGCGCC GGGCGGCGCG
GCGATGATCA TTGGGCGCTA TCTCGCGGGC GGGCTGTTCA TCGCGCTCGG CGTCGCCGCG
ATCGTCGAGC GCTGA
 
Protein sequence
MRRTRDVAPI GGLARGPAAA ACPLPPRHLS VAQHRGRALS SPERPFHLRI APRALRVARR 
GFDFRRRRRI TADASQCRFR PSLSDGGRPR FLDERFPMTV NPTLAFIATC IGFGFIPGPA
LLQTVSLTLQ HGRRAGVLSA LGIHLGAFFQ ICSVAIGAVV VLDTSPWLYH ALRIAGGGYL
IWLGIQRIRT REANDGGDGA PSTVPKNVIS ASALIEASNP KSALFYLSFL LQFVDPSASL
DVGWQLFLLG AGANLLFSLA DLTCIALAHP LRKRAAPGGA AMIIGRYLAG GLFIALGVAA
IVER