Gene BURPS1710b_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2853 
SymbolhisQ 
ID3690550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3160742 
End bp3161431 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID637729309 
Producthistidine transport system permease protein 
Protein accessionYP_334237 
Protein GI76809420 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCTAT ACGGCTTTGG CCCGCTCATC TGGGCGGGCA CCGTGCAGAC GATCGAGCTG 
TCGGTGCTGT CGCTCGCGGC GGCGGTGCTG CTCGGCCTCG TCGGCGCGGT CGCGAAGCTC
TCGCACAATC GCGTGCTGCG CGCGATCGCG ACGGGCTACA CGACGCTCAT TCGCTCGGTG
CCCGATCTCG TGCTGATGCT GCTGCTGTTC TACAGCATCC AGATCTGGCT CAATCAGTTC
ACCGATCTGA TGAGCTGGGA TCAGATCGAT ATCGATCCGT TCGTCGCCGG CGTGCTGACG
CTCGGGTTCA TTTACGGCGC GTACTTCACC GAAACCTTTC GCGGCGCGTT CCTCGCGGTG
CCGCGCGGCC AGCTCGAGGC GGGCAGCGCG TACGGGATGA ACGGGATGCG CGTGTTCGCG
CGAATCATGT TTCCGCAGAT GATGCGCTTC GCGCTGCCGG GCATCGGCAA CAACTGGCAG
GTGCTCGTGA AGGCGACCGC GCTCGTGTCG ATCATCGGTC TGGCCGACGT CGTCAAGGCC
GCGCAGGACG CGGGCAAGAG CACGTTCAAC ATGTTCTTCT TCATTCTCGT CGCGGCGCTC
ATCTACCTGG CGATCACGAC GGCCTCCAAT CTCGTGCTCA GGCAACTCGA GAAACGTTAT
TCCATCGGCG TGAGGCACGC GGAACTATGA
 
Protein sequence
MFLYGFGPLI WAGTVQTIEL SVLSLAAAVL LGLVGAVAKL SHNRVLRAIA TGYTTLIRSV 
PDLVLMLLLF YSIQIWLNQF TDLMSWDQID IDPFVAGVLT LGFIYGAYFT ETFRGAFLAV
PRGQLEAGSA YGMNGMRVFA RIMFPQMMRF ALPGIGNNWQ VLVKATALVS IIGLADVVKA
AQDAGKSTFN MFFFILVAAL IYLAITTASN LVLRQLEKRY SIGVRHAEL