Gene BURPS1710b_2146 details

Gene Information

• Locus tag: BURPS1710b_2146
• Symbol: sypC
• ID: 3691389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 2348931
• End bp: 2350841
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637728602
• Product: syringopeptin synthetase C
• Protein accession: YP_333541
• Protein GI: 76811995
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3319] Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00315246
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGTTT CGACCGATAC GTCCGCCGAA GCCCATTCAC CGGCGCCGAA TGCTCGCGAC 
ACCGACTCAC GCGCAGACTC ACTCGATATG TCAGACAGTG ACGCACTGCG CCGGATTGCC 
GAAGCCGTCG ACGGCGGTGC GGCGAACATC GAGCGAATCG TTCCGCTCGC CCGTGCGCGC 
GAGCGTATGC CGACGCGGCC TCGGCTCGAG CGGTGCGGCG GCGGGCGAGT GACGGCGGCG 
CACATCACGC TCGACTCGCG TGCGCGTCTC GATGCGTTGC TGCACGCATT GCAACGCGCG 
ATCGACCAGA ACGCGGACCT GCGAACGTGC ATTTTGGGGG CGTGCCTGCG GCGGCCGATG 
CAAGTCACGC TTCGCGAGGT TCGCCTGCGA GTGCACGCCG CGACGCTCGA CCCCGACCTC 
GATCCCGCCG CGCAGTTGGC CGCGCTGAGC ACCGGGCCCG GCATGCGCAT CGACATGCAA 
CGCCCGCCGT GGGTGCTCGC GTGCATCGCG CGCATTCCGG GCAGCGGGCA ATGGCTGCTG 
CGGCTCGTGG CAGCCCCGAT CGCGGCCGGA TTCGACGCGC TCGACGCGCT GCTTCGCGAG 
GCGGTGATTC ACGGCGACCG GGAGCCCGGG CCGACGCCGT TTCACTGGAC TGTGGAAACG 
GCTGTTGAAT CGTGCGGAGG CGAACCTGCG TCGTTGCCGA CCGCGGGCGC GGTTTGGCCG 
TCGAACGACG TATCACGCGC TTGCGATCCG GATGCCGCGT CGTGCGTCGA GGCGCGCATC 
GCCGCGATCG CGTCCGATCT GCCGGGCGTC GTGCATGGCG GACCACGAGA CGATTTGCGC 
GCGCTCGGAC GAACGCCGTT GCAGGCGCTT CGACTCGCGC GCCGTATCCG CGACGCGCTG 
GGCGTGACCG TACCGGTCGA GTCGATCCTC GCGAGTCCGA CCATCGTCGA GCTTGCCGGA 
TACGTCGAGC AATTGCGCTC GCGGGACGTC CGCGACGGCG CTGCGCCCGT GTCGATCGGC 
GAAAAACCGG CGGACGCGGA TGCTCGGGCG CAGGCGCAGG CGCAGGCGGA TACGGATACG 
GCGCACACCG ATTGCCTGAT CGTCATTCAA GCAGGCGGCG CCGAACAAGC GCCGGTGTTC 
TGCATCCCGG GCGCGGGGGG CAGCGTCGCG TCGTTCGTTG CGCTTGCGAG CATGCTGCGC 
GCCGACATAC CGGTATACGG CTTGCAGCCT CGCGGGCTGG ATGGCCTGGG GCCGCCGGAC 
CGGTCCGTCG AAGCGGCTGC GCGCCGGTAC GCGCGGGCCA TTCTGGATGC CGCCCCGCCC 
GGGCCGCCGC GCATCGTCGG CCACTCGTTC GGCGGCTGGA TCGCGCTCGA GACGGCGCGG 
CTGCTGGACG GCATGGGAAC GCGCTGCGCC CCGCTCGTCC TGCTCGATTC GAATCCACCG 
CCCGCGTCGC AGGCCTGGCG CGCGCCTTCC GAGGCAGACA TGCTGCGCAC GCTCGTCGGC 
CTGCTCGAGC AGGCCGCGGG CGGCGCCCCA TCCGGGATCG GCGACGAAGA AATCGCCCGT 
TGCGCGGCAG CGGGCGAGGA TGCGCGGGAT GCGCTCGTCC ACGCCTGCAT GGTGAGGACC 
GCCCTGCTGC CGCCGCGCGC GCCGGTCGAA GCGGTGCGGC ACCTGCGGCG GGTATTCGAA 
GCCCATTCGA GCACCCGCTA CGCGCCGGGC GGCCGATACG CGGGCGACGC AACGGTGATC 
GTCGCCAACG GCGATCGCGA CGCGGGCGAG ATGGTGCCGG CGTTCGGATG GGCCGCGCTG 
ATCGAGCGAG TCGAGGTGGC CGTGACGCCG GGCAATCACA TGAGCATGCT CGCGGCGCCG 
TATGTTCGTC ACGTCGCGCT GACGATGAAG GCGGTATGGC GCATGATCTG A 

 

Protein sequence

MHVSTDTSAE AHSPAPNARD TDSRADSLDM SDSDALRRIA EAVDGGAANI ERIVPLARAR 
ERMPTRPRLE RCGGGRVTAA HITLDSRARL DALLHALQRA IDQNADLRTC ILGACLRRPM 
QVTLREVRLR VHAATLDPDL DPAAQLAALS TGPGMRIDMQ RPPWVLACIA RIPGSGQWLL 
RLVAAPIAAG FDALDALLRE AVIHGDREPG PTPFHWTVET AVESCGGEPA SLPTAGAVWP 
SNDVSRACDP DAASCVEARI AAIASDLPGV VHGGPRDDLR ALGRTPLQAL RLARRIRDAL 
GVTVPVESIL ASPTIVELAG YVEQLRSRDV RDGAAPVSIG EKPADADARA QAQAQADTDT 
AHTDCLIVIQ AGGAEQAPVF CIPGAGGSVA SFVALASMLR ADIPVYGLQP RGLDGLGPPD 
RSVEAAARRY ARAILDAAPP GPPRIVGHSF GGWIALETAR LLDGMGTRCA PLVLLDSNPP 
PASQAWRAPS EADMLRTLVG LLEQAAGGAP SGIGDEEIAR CAAAGEDARD ALVHACMVRT 
ALLPPRAPVE AVRHLRRVFE AHSSTRYAPG GRYAGDATVI VANGDRDAGE MVPAFGWAAL 
IERVEVAVTP GNHMSMLAAP YVRHVALTMK AVWRMI