Gene BURPS1710b_2104 details

Gene Information

• Locus tag: BURPS1710b_2104
• Symbol: rhsA2
• ID: 3689823
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 2295521
• End bp: 2300302
• Gene Length: 4782 bp
• Protein Length: 1593 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637728560
• Product: rhsD protein
• Protein accession: YP_333499
• Protein GI: 76810876
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3209] Rhs family protein
• TIGRFAM ID: [TIGR01643] YD repeat (two copies)

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0967057
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTGC CTGCCGTAAA GCATCTGGAT CCAGTGGTCG GCGTGGACGT CCACGCGGTG 
ATCGTTGCAC CCGAACCGGC GCCTATCTAT TTGCCGCATC CGCATGTCGG CTTCGTGCTG 
GATCTGCGCG AATATATCGA CGCAGCTCTC GGCGTGATCG GCAGCATCGT GTTCACGTTC 
GTCGAAGAAG AGGCGATCGA CTACCTTCAG GACAACCCCG ATGTCGCGAA CGAGCTGGAC 
CATGCGCTCA AGTCCGCGGC GACTGACCTG CAGCAGGCGG ACGCCGAGTT GATGCGCAAC 
CCGCTGATCG CCGGGGGCGT GAAGTTCAGC AAGGCGGCGG GCTCGGTTGC AGGCGACATC 
GCCAGTTCGG CCGGCGACAT CGCCAACGCA GCTGGCGCCG GTGTCGGAAT GGGAAGCGTG 
GCGGGCCGCC CCATTTTCAT AAACGGCTTT TTGCGGGCCA CGGCAGGTAC TCACTCGTTT 
CACGTGCCGG GCCTGCACTT CCCGTTGGGC GAGTCATTCG CCCCGCCCCC TGCCGAACTA 
CCGTCGAATG ACGCTGAATC CTATATGGGC AGCAGGACGG TACTGGCTAA CAACGATCCG 
CTGTCGTTCA TGGCACTACC GGCGATGAGC TGCTGGTCGA TCGGGCTCGA GCCGCCGCCG 
CATAACGGCG CACACACGGA GAGAACGGCG CTGTCGATGC CGAGCTCGGT GATGCTGCCG 
ATTCCAGTAG GGCGACCAGT GCTGGTGGGT GGACCACCGA TCATGAACAT GGCGGCACTG 
GCTTCGTCAC TGTTCAAGGC CTTTCGCGGA AGCAAGTGGG CCAGGGCGCT GGCCGACAAG 
CTCAATCTCA AACCGGGCTT TCTGCGCTGC ACGGTGCTCG GAGCCGATCC GGTAGACATG 
ATCACGGGCG AAGTGGTCAT GCAGCAGCAC GATTTCACGG TGTCGGGGCG GCTGCCGCTC 
GTATGGGACC GGCATTACAC GAGTCACGAT ATGCGGCGCG GCGCGGTTGG CGTGGGCTGG 
CAGACGCCGG CTGATATTCG GCTTGAACTG ATGCGGCACG AGGGCAGCGT GGGGGTAGCG 
GCGTATTTCC CGGGGCACGC GACGGCTTTC GATGCGATGC CGGATGCAGC CGGGTGGCCG 
GCGCGCGTGT ATGACTGGCA ACACGGCCAC GCGCTGTATC GGCAGGACGA CTGCCTGCTT 
CTGCGCACGC GCGCCGGGAT CGAATATGCC TTTGCGTTGC CCATGCACTG GCAATACGCG 
CTGGAGAAGC TCCGGGACGA CGCCACGTTG GCGCTGCCCG TCGGGCGCAT GGCTGACCGC 
AACGGCAATG CGTGGGTATT CGAGCGCAGA TTGGATGGCA GCTTGGCGCG TCTTGTCGAG 
TGGAAAGGAG AAGAGGCGAC CGGACGCGTG ATCGAATGCG AGGCGGCTAC GGGCAGCCGG 
GCCGGAAGCC ATGCGGATCT GCTTACTGCG CTGACGCTCA TCGATTCCGG CGGCCGGGCC 
CATCCGCTTG TCGGTTACGC ACACGACCGG AACGGAGATC TGGTTGCTGC GCTCAATGCG 
ATGAGCCAGC CGCATCATTT CGCTTACACC GACGGGCACC GGATGGTTCG CCACACGAGC 
GCGCGGGGCG TGTCTTTCTA CTACAATCAC CAGCAGCATG ACGACGGCGT ATGGCGCGTC 
GATCACGCGT GGGGCGACAA AGGCCTGCTC GATTACCGGT TTGTCTACGA TATCGAACGT 
AGGGAGACGC GGATCACCGA TTCGCTAGGC CACTCAACGA TCCTCCAGGC CAACGAGCGC 
GGCATGCCGG TGGCGCGCAT CAATCCCCTC GGGGGTGTCT GGAGTTATCG CTACGACGCG 
CAGGGACGCG CGAGTGCGGA AACAGATCCC GCCGGGCGCG TCACTACCTG GGAGTACGAC 
GCGTACGGTA ATCTGCTTGC GCAGACGTTG CCAGATGGGA GTGCCGTCCG CGCGGAGTAC 
AACGCGGACC ATAAGCCCGT ACAGGTGACG GATACGAGTG GGAGGCAACG GCAATATGCA 
TGGGATGAGC GCAATAACCT CCTCGGACAG ATCTCGCCAA CGCAAGCAAG CTCGCAATAC 
GGCTACGACG CGCATGGACA AGTTGTGTCG CATACGGGAC CCTGCGGCGC CGTGACACGC 
TTCCTCTACG ATCACGATGG CAATCTCGCA GAAATCGTCA ACGCGCTCGG CCACTGCACC 
CGGTACACTT ACGACGCTCG GGCCAACGTC ATCGAGACCG TCAGCGCGCT GGGCCAGGTA 
AGCCGTTACG AATATGATCG CAACGGTAAC CTAACGCGAG CGATCGAGCC AGGAGAGCGG 
GAAATCTCCT GCAGCTATGA CGCCGACGGT AATTTGGTGC GCTACCGCGA TCCGAATGGC 
CACGTCACTC AACTTGAATA TTCACCGCTG AGTCAGATCA CCAAGCGACT GTTGCCGGGC 
GGCGGTGTGG TCGAATACCG ATACGACACC GAGGAGCGAC TGGTCGGCGT CGTCAATGAG 
CGCGGCGAGC TGTACCTGCT GAAACGTAAT GCCGTGGGGC AGATCGTCGA AGAGGTCGAC 
TACTGGGGTC AGTTGCGGCG CTACGAGTAC AGTGCGAGGG GCGATGTGCA ACGCAGCATC 
GATCCGCTGG GCCAATCCAT CGACTATGAA ACGGATAGAC TCGGACGTAT CGTGCAAAAG 
CGTATTCCCG ACCTGCGGCG ACCCGATCGA ATGCGCGTTG AGAGGTTCGA GTACGACCGT 
GGCGGCAATT TGGTCATCGC CGAGAGTCCG GACAGCCGGG TCGAACTAAG CTATGACGCC 
GCCGGTCGCG TAGTCGAGGA AAGGCAGGGC GATGAGTTCG TGATCGCCAC TGCGTATGAC 
GCGGCAGGCA ATCGCATTAA ACGCCAGACC CGACTGAACG CGCGCGGCGA AATTGTAACG 
CACACGGTTC GTTATGGCTA TGACGCGCTC GATGCGGTCA CCTCGATTCA GGTGGACGAC 
GCTGCGCCAA TCACCTTCGA ACGGGATGCA CTCGGACAAA TCCGCGTCGA GCATCTTGGG 
ACCGAATTGC GCCGGGAGTT GTCGTACACG TCGGAGGGAC TGCTGGCAAA GCAAACCCTG 
TTTTCCGGTA CCAGCCCGTT GTTCGCCAGC GAATACGCGT ATGACGCAAA CGGCGAGCTA 
CTCGAGAAGA TAGACTCCCG TCTCGGTCCT GAGCGCTATC AATACGATCC TATGGGTAGG 
CTGACCAGAC ACCTCGACCC GGCCGGCAAG CTGCATCGCT TCCTGTACGA CCCGGTGGGT 
GATCTGTTGA CGACGCGGGT TGGTCTGGTC CACCAGACCA GTATGTCCGG CCAGGGGCCA 
CAGGCCGACC CATGGATACG GGAAGGCGAA TACGACGGCT GCTATTACGC GTATGACCGT 
GTGGGCAACT TGATCCGTAA GCTGGGCGCC GACGAAGATC TGACATTGCG TTGGGATGCA 
GCCGGGCAAC TGGTCGAGAC TGTGTCACTG CGGCCCGTAC TCGCAAAAGA TGCGGGCCAC 
CGCGTCCGCA TTCGAGCAGT ATACGAATAC GATGCGTTCC AGCGACGCGT GCGCAAGGTC 
GTGGATGTCA AACAGGACAG ACACGAATCA CCAGAAACTC TCGAAAACGC CAGCGCACCC 
ACGCACATTT GCCGCTACTT TTGGGACGCA GATACGTTGA TCGCCGAATA CGGCCACGAC 
GCTGAAGACC CCTTACTCTT TCTTGGCGAT GCGGACGCTT CTGCGCGACC GACGCTATTG 
CATAGGGATT GTGTGGCCGT GGAGCGCCCG TTTCGTGGCA ATCGCGAGTG GGTTTATTAT 
CCAAGAACCT TTCAGGTTTT GGCTGTAGCG CTTTGCTGCG ACCCGCATCG CGACGATCCC 
AATCTCGCAA GCATAAGCGC GAACAACGTT ACAGGTTCCG CGCCTTTGGG AGCCGCGGAT 
GCCGCACTAT CCCTGATCCC AGCAGTCCCG ACTCTTTCGG GAAATCGCAC ATACTTCTTC 
GAGAACGATT TGAACGGGGC ACCGGTGCGG ATATACGACG ATTGTGGTCG CATAGTTTGG 
GAGGCGCGTT ATGGGCCGCA CGGGGGTATT GCAAGTATTG AAACGGATGT AATCCAACAG 
CCGATCAGGC TTCAGGGGCA AATTTTTGAT TGGGAGTCAG GTCTCAGCTA CAACAGGTAT 
CGATATTTCC TTTCTAGTAT CGGTGCTTTT GTAAGCCAAG ACCCTATCGG TCTTGTTGGT 
GGCGTAAATT TATATCGATT TGCACCGAAT GCATTCGGTT GGACAGATCC GTTAGGATTG 
AAGAAGCGTA AACGGAAATT TGTGAATGGC GTAAGAGCGA CGATTGTCGT GGGAAACGGC 
GTGCCTCAAA TTTTTTCAAG TGGACCGAGG GGACATGGCG AACAGGAAGC ACTCTTTGAT 
AACCTGCTTG ATATTGAGAA TCAGGATGTT ACACTTAAAG ATATTGAGGG TGATTTCCAC 
GATGATGACG GTGATTTTGT GGGGCCCATA ACGATTTGCA CTAAACGCTG TAGAAGTGAG 
ATGTTCTGGG GGGCGCATAT CGGCGGCGCT GCCTCCTTAA CTTTTCCAAT GGTCGTAGGT 
GAAAATTTTG TGAGAGATGT GACAATTGCG CGAAGGCATT TCGCATATCT AGCTGATGAA 
ATGGAGCGTA TTCAAATTGA GGAATCTCAT GCGGCAACTC GAGCAAAAAA ACAATGGGAG 
GCCATAACGC TCTGCGAGAA TGGGCAATGT AGTCATCCTT GA 

 

Protein sequence

MALPAVKHLD PVVGVDVHAV IVAPEPAPIY LPHPHVGFVL DLREYIDAAL GVIGSIVFTF 
VEEEAIDYLQ DNPDVANELD HALKSAATDL QQADAELMRN PLIAGGVKFS KAAGSVAGDI 
ASSAGDIANA AGAGVGMGSV AGRPIFINGF LRATAGTHSF HVPGLHFPLG ESFAPPPAEL 
PSNDAESYMG SRTVLANNDP LSFMALPAMS CWSIGLEPPP HNGAHTERTA LSMPSSVMLP 
IPVGRPVLVG GPPIMNMAAL ASSLFKAFRG SKWARALADK LNLKPGFLRC TVLGADPVDM 
ITGEVVMQQH DFTVSGRLPL VWDRHYTSHD MRRGAVGVGW QTPADIRLEL MRHEGSVGVA 
AYFPGHATAF DAMPDAAGWP ARVYDWQHGH ALYRQDDCLL LRTRAGIEYA FALPMHWQYA 
LEKLRDDATL ALPVGRMADR NGNAWVFERR LDGSLARLVE WKGEEATGRV IECEAATGSR 
AGSHADLLTA LTLIDSGGRA HPLVGYAHDR NGDLVAALNA MSQPHHFAYT DGHRMVRHTS 
ARGVSFYYNH QQHDDGVWRV DHAWGDKGLL DYRFVYDIER RETRITDSLG HSTILQANER 
GMPVARINPL GGVWSYRYDA QGRASAETDP AGRVTTWEYD AYGNLLAQTL PDGSAVRAEY 
NADHKPVQVT DTSGRQRQYA WDERNNLLGQ ISPTQASSQY GYDAHGQVVS HTGPCGAVTR 
FLYDHDGNLA EIVNALGHCT RYTYDARANV IETVSALGQV SRYEYDRNGN LTRAIEPGER 
EISCSYDADG NLVRYRDPNG HVTQLEYSPL SQITKRLLPG GGVVEYRYDT EERLVGVVNE 
RGELYLLKRN AVGQIVEEVD YWGQLRRYEY SARGDVQRSI DPLGQSIDYE TDRLGRIVQK 
RIPDLRRPDR MRVERFEYDR GGNLVIAESP DSRVELSYDA AGRVVEERQG DEFVIATAYD 
AAGNRIKRQT RLNARGEIVT HTVRYGYDAL DAVTSIQVDD AAPITFERDA LGQIRVEHLG 
TELRRELSYT SEGLLAKQTL FSGTSPLFAS EYAYDANGEL LEKIDSRLGP ERYQYDPMGR 
LTRHLDPAGK LHRFLYDPVG DLLTTRVGLV HQTSMSGQGP QADPWIREGE YDGCYYAYDR 
VGNLIRKLGA DEDLTLRWDA AGQLVETVSL RPVLAKDAGH RVRIRAVYEY DAFQRRVRKV 
VDVKQDRHES PETLENASAP THICRYFWDA DTLIAEYGHD AEDPLLFLGD ADASARPTLL 
HRDCVAVERP FRGNREWVYY PRTFQVLAVA LCCDPHRDDP NLASISANNV TGSAPLGAAD 
AALSLIPAVP TLSGNRTYFF ENDLNGAPVR IYDDCGRIVW EARYGPHGGI ASIETDVIQQ 
PIRLQGQIFD WESGLSYNRY RYFLSSIGAF VSQDPIGLVG GVNLYRFAPN AFGWTDPLGL 
KKRKRKFVNG VRATIVVGNG VPQIFSSGPR GHGEQEALFD NLLDIENQDV TLKDIEGDFH 
DDDGDFVGPI TICTKRCRSE MFWGAHIGGA ASLTFPMVVG ENFVRDVTIA RRHFAYLADE 
MERIQIEESH AATRAKKQWE AITLCENGQC SHP