Gene BURPS1710b_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1998 
SymbolgltP 
ID3690087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2168467 
End bp2169885 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content65% 
IMG OID637728454 
Productsodium:dicarboxylate symporter family protein 
Protein accessionYP_333393 
Protein GI76808762 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.236105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGCCG TACCGGAAGG CGCGCGAACA GCTCAGATTT CCAGTCCACT GCTTGCACGC 
CGGCGAGCCG CGCCGTCATT CGCAACACCT GCCGCGCAAT TTGGACTCCT CATGAAGAAA
AGACGCAACA TCACCTCGTA CATCGTGATT GCGATGATCC TCGGCATCGC GGTTGGCTAC
GGCTGCCACA GCGCGTTTCC GGATCCGGCG ATCGCGAAGG AAATCGCCGG CTACGTCTCG
CTGCTGTCCG ACGTGTTCCT GCGTCTCATC AAGATGATCA TCGCGCCGCT CGTGTTCGCG
ACGCTGACGG TCGGCATCGC GCACATGGGC GACACCGGCG CCGTCGGCCG CGTCGGCGTG
AAGGCGCTCG GCTGGTTCTT CATCGCGTCG TTCACCTCGC TGCTGCTCGG CCTGCTCGCC
GCCACGCTCC TGCAGCCGGG CAGTCACCTG AGCCTGCCGC TGCCCGCCAC CGACGCCGCC
GTCAACCTGA AGACGAGCGC GTTCACGCTG AAGGACTTCG TGATCCATCT GGTGCCGAAG
TCGATCGCCG AGGCGATGGC GAACAACGAG ATCCTGCAGA TCGTCGTGTT CTCGATCTTC
TTCGGCACGG CGCTGTCCGC GCTCGGCGAC GCCGGCAAGC GCCTGACCGG CGTGATCGAG
GATCTCGCGC AAGTGATGCT GAAGGTCACG GGCGCGGTGA TGTGGTTCGC CCCCGTCGCG
GTGTTCGCGG CGCTCGCCTC GACGATCACG ACGGAAGGAC TCGGCATCCT GCTCACGTTC
GCGAAGTTCA TGGGCAGCTT CTACATCGCG CTCGCGCTGC TGTGGGGCGT GCTCACGCTC
GCGGGGCTCG TGTTCCTCGG CAAGCGCACG TTCACGCTGA TCCGCCTGAT TCGCGAGCCG
TTCCTGCTGT CGTTCGCGAC CGCGAGCTCG GAGGCCGCGT ACCCGAAACT GCTCGACGCG
CTCGACCGCT TCGGCGTGAA TCGCAAGATT TCGAGCTTCG TGCTGCCGAT CGGCTATTCG
TTCAACCTCG ACGGCTCGAT GATGTACTGC ACGTTCGCGG TGCTGTTCAT CGCGCAGGTA
TACGGCGTTC ACCTGCCGCT CGGCACGCAG ATCACGATGC TGTTGCTGCT GATGCTCACG
TCGAAGGGCA TGGCGGGCGT GCCGCGCGCA TCGCTCGTCG TGATCGCGGC GACACTCAAT
CAGTTCCACC TGCCCGAAGC GGGCCTGCTG CTGATCATGG GCGTCGACAT GTTCCTCGAC
ATGGGCCGTT CGGCGACCAA TGCGGTCGGC AATTCGATCG CGGCCGCCGT CGTCGCGAAG
TGGGAGGGCC AGCTCGACGC CCCGCGCGAC GATGCCGACT CCGATTCCGA CAGCGGCGAC
GCATCGCGCG GATCGCCGCG GATCACGCAG CGCGTGTAG
 
Protein sequence
MRAVPEGART AQISSPLLAR RRAAPSFATP AAQFGLLMKK RRNITSYIVI AMILGIAVGY 
GCHSAFPDPA IAKEIAGYVS LLSDVFLRLI KMIIAPLVFA TLTVGIAHMG DTGAVGRVGV
KALGWFFIAS FTSLLLGLLA ATLLQPGSHL SLPLPATDAA VNLKTSAFTL KDFVIHLVPK
SIAEAMANNE ILQIVVFSIF FGTALSALGD AGKRLTGVIE DLAQVMLKVT GAVMWFAPVA
VFAALASTIT TEGLGILLTF AKFMGSFYIA LALLWGVLTL AGLVFLGKRT FTLIRLIREP
FLLSFATASS EAAYPKLLDA LDRFGVNRKI SSFVLPIGYS FNLDGSMMYC TFAVLFIAQV
YGVHLPLGTQ ITMLLLLMLT SKGMAGVPRA SLVVIAATLN QFHLPEAGLL LIMGVDMFLD
MGRSATNAVG NSIAAAVVAK WEGQLDAPRD DADSDSDSGD ASRGSPRITQ RV