| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1881 |
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| Symbol | |
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| ID | 3690472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2051318 |
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| End bp | 2052406 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637728337 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_333282 |
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| Protein GI | 76809165 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0472416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACG CGGCCGGCGC ACCGGCCGCT TCATTCGCGC CCGAGCGGCG CGCGTTCCTG
GCCCGTGCGG GCGGCGGGCT CGGCCTCGCG GCGGTCGGGC TCGCGCTCGG CGCGGCAGCG
GCGCCGGGCC GGGCGCTCGC GGCCGGCGCC ACGGCCACCG CCGATACCGG CGCGGCGTCG
CTCGCCGGCG GCTCGCTGCG GCGCTCCCCC GCCGGCGAGC CCGAGGCGGC GCACGGCGCG
TTCTGGCCGA ACGGCGCGCG GCTCGTGATC TCGATCTCGA TGCAGTTCGA GGCGGGCGGC
CAGCCGCCGA CGGGCGCCGA CAGCCCGTTC CCGCCCGTCG ACTTTCCGCC GCAGGTGCCC
GTCGATCTCG CGTCCGCGAC GTGGTTCGCC TACGGCTATC GCGAAGGCAT CCCGCGCATG
CTCGATTTGT GGGACCGGCA CGGCGTGAAG GTCACCTCGC ACATGATCGG CGAGGCCGTG
CGCCGCCGGC CGGACCTCGC CCGAGAGATC GTCGCGCGCG GCCACGAGGC GGCCGGACAC
GGGCCGCGCT GGAGCGCGCA GTACGCACTC CCCCGCGACG AAGAGCGGCG CTTCCTGATC
GCCGCCCGCG AGATGGTCGA AACCGCGACG GGCACGCGGC CCGTCGGCTA CAACTGCAAC
TGGCTCAGAC GCGGGCCGAA CACACTGCCG CTGCTGCAGG AGCTCGGCTA TCTGTACCAC
ATCGACGACG TGAGCCGCGA CGAGCCGTTC ATCGAGCAGG TGAACGGCCA GGATTTCGTC
GTCGTGCCCT ACACGCTGCG CAACAACGAC ATCCTGCTGA TCGAAGGCCG CAACTATTCG
CCCGGGCAAT TCCTCGAGCA GATCAAGCTC GACTTCGATC AGTTGTACGA CGAAGCCGCC
ACGCGGCGGC GCATGATGTC GATCAGCGCG CACGACCGGA TCAGCGGCAC GCCGCAGATG
GTGCGCGCGT GGGACGCGTT CCTGCGCTAC GCGCAATCGC ATCCGGGCGT CGCGTTCATG
CGCAAGGACG ACATCGCCCG CCATGCACGG CGCAGCCCGC TCACGCTGCG CGAACCCGAA
ACCCTCTGA
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| Protein sequence | MSDAAGAPAA SFAPERRAFL ARAGGGLGLA AVGLALGAAA APGRALAAGA TATADTGAAS
LAGGSLRRSP AGEPEAAHGA FWPNGARLVI SISMQFEAGG QPPTGADSPF PPVDFPPQVP
VDLASATWFA YGYREGIPRM LDLWDRHGVK VTSHMIGEAV RRRPDLAREI VARGHEAAGH
GPRWSAQYAL PRDEERRFLI AAREMVETAT GTRPVGYNCN WLRRGPNTLP LLQELGYLYH
IDDVSRDEPF IEQVNGQDFV VVPYTLRNND ILLIEGRNYS PGQFLEQIKL DFDQLYDEAA
TRRRMMSISA HDRISGTPQM VRAWDAFLRY AQSHPGVAFM RKDDIARHAR RSPLTLREPE
TL
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