Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1842 |
Symbol | |
ID | 3690788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2008813 |
End bp | 2010177 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637728298 |
Product | LysM domain-containing protein |
Protein accession | YP_333243 |
Protein GI | 76809599 |
COG category | [S] Function unknown |
COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGCGC GCGGGTTCGT GACGAAGTAC GTGCTGACGG CATGCTGTGC CGCAGCGACG GCGCTCGCGG CGCAGCACGC CGCCGCGCAG TCGGCTAAGA ACCGGTCGGT GGCGACCGTC GACTACACGA CGCGCAGCGG CGACACGCTG TACGACGTCT CGGCCCGCTA TCTGCAAGGC ACGGACGACT GGCCGCTCGT CGCGCAACTG AACGACGTGC CGGTGCCGAA GCATCTGCAG CCGGGCGTCG TGCTGAAGCT GCCCGCCGCG CGGCTGCGCA AGGAGCGGCT GTCGGCGCGG GTGATCGCCG CGCACGGCAC GGTCGAGAGC GCGGGGCGCG GCTCCGCGCA GTTCGCGCCC GTCGCCGTCG ACGCGACGCT CACGGAAGGC GACCGCCTGC GCACGGGCTC GAACGCGTTC GTCACGCTCG AGCTCTCGGA CGGCACGCAC CTGAGCCTGC CGCCCGACAG CCAGATCGAT CTCGCGACAC TGCGTCGCAC GGTGCTCACG GGCACGCTCG AGCGCGTGAT CGATCTGCGC CGCGGCTCGG TCGACAGCGA AGTCACCCAT CTGAAGAAGA AGGACGATCG CTTCCAGATC CGCTCGCCGT CGGTCGTCGC CGGCGTGCGC GGCACGCGCT TTCGCGTGAA TTACGACAAG GATGGCCGCG CGTCGACGAC GGTCGAAGTG CTCGACGGCA CGGTGGGCGT CGCGCCGAGC GCGAAGCGCT CGGCCGACAC GCTCGTGCAC GCGAACTTCG GCAACGTGAC GAGCGCAAGC GGCGTCGTCG GCAGCCCGAT CGCGCTGCTC GACGCGCCGC AGCTCGCCAA CCCGGCGAAG ATCCAGGACG ATCCGCAGGT CGCGTTCGAC CTCGTGCCGC TCGGCGGCGC GCAAAGCTAT CACGTGCAGA TCGCGCGCGA CGCGGGCCTG TACGATCTCT TCAAGGAAGT GCAGGTGCCG GCGCCGCGCG CGACGTTCGC CGACGTGCCG GACGGCACCT ATTTCGTCCG GATCGCGGCG ATCGATTCGC ACGGTCTCGA GGGCCAGCCG CGCATCTACG CGTTCGAGCG GCGCCGCTTC GGGGTCGACG CGTCGGCCGC GCCCGCCGAC GGCGGCTACG CGTTCCGCTG GTCGACGACG CAAGACGGCG CGGCGGCCGG CGCGACGCGC TTTCGCTTCG TACTGTCGCG CTCGAAGGAC CTGAGCAACC CGATCGTCGA CCAGGTCGAC GCGCAGGGCG GGCGCATCGC CGTGTCGAAC CTGACGCCGG GCGACTACTA CTGGAGCGTG ATCGCGGAGC GCTACGAAGG CGGCCGTTTC CACGAAAAGG CCAGCGCGGT CAACGCGTTC ACGATCGCGC GCTGA
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Protein sequence | MNARGFVTKY VLTACCAAAT ALAAQHAAAQ SAKNRSVATV DYTTRSGDTL YDVSARYLQG TDDWPLVAQL NDVPVPKHLQ PGVVLKLPAA RLRKERLSAR VIAAHGTVES AGRGSAQFAP VAVDATLTEG DRLRTGSNAF VTLELSDGTH LSLPPDSQID LATLRRTVLT GTLERVIDLR RGSVDSEVTH LKKKDDRFQI RSPSVVAGVR GTRFRVNYDK DGRASTTVEV LDGTVGVAPS AKRSADTLVH ANFGNVTSAS GVVGSPIALL DAPQLANPAK IQDDPQVAFD LVPLGGAQSY HVQIARDAGL YDLFKEVQVP APRATFADVP DGTYFVRIAA IDSHGLEGQP RIYAFERRRF GVDASAAPAD GGYAFRWSTT QDGAAAGATR FRFVLSRSKD LSNPIVDQVD AQGGRIAVSN LTPGDYYWSV IAERYEGGRF HEKASAVNAF TIAR
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