Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1404 |
Symbol | |
ID | 3690793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1479827 |
End bp | 1481275 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637727860 |
Product | major facilitator family transporter |
Protein accession | YP_332814 |
Protein GI | 76809604 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGCGCC GGCGCGGCGT CCGCGACCGG TATCGTCGTC GCTTCGATCG AGGACGCTTC ATGAAAGACC CGCTTGAATC CGCTTGCCCG CCGGCGCCGG GATGCGGAGC CGGCGCCGAC GGTGCGGCCT GTGCGGCCGC CATGGCCGGG ATGGCCGGCG TGGACGGCGT GGACGGCGCG GATGCGGCAC GCGCCGACGC CCGTCGCGAC GTCGCGGCGG TTGCGCTCGG CAACGCGATC GAATTCTTCG ACTTCGGCGC CTATGCGACC TTCGCGGTGA TGATCGGCCG CACGTTCTTC CCGACGCAGC GCCCGTTCGT GAGCCTGCTG CTGTCGGTAT CCGTGTTCGG GCTCGGCTTC GTCGTGCGGC CGCTCGGCGC GCTCGTGATC GGCGCGTACG CGGACCGCGC GGGACGCAAG CCCGCGATGA CGCTGACGCT CGCGATGATG GCGGTCGGCA CGGGCGCGAT CGCCGTGCTG CCGGGATACG AGACGATCGG CGTCGCGGCG CCGATCCTGC TCGTCGTCAC GCGGCTGATC CAGGGGCTCG CGTGGGGCGG CGAGGCGGGG CCCGCGACGA CCTACATTCT CGAGGCCGCG CCGCCCGAGC GGCGCGCCGC GTACGCGTGC TGGCAGGTCG CGACGCAAGG TTTCGCGGCG GTCGCGGCGG GGCTCGCGGG CTACGCGCTG ACGCTCGCGC TGCCCGAGGC CGAGCTGGAT GCGTGGGGCT GGCGCGTGCC GTTCGCGCTC GGCCTGCTGG TGCTGCCGGT CGGCGTTTAC ATTCGCCGGC GGTTATCCGA CACGATCGAC CCGCGCCACG CATATTGCAC GACGCGCGAG ATCCTGCGCG AGCTGAACGC TCGGCACCGG CGGCCGATCG CGATCGGCCT GATGATCCTG CTCGGCAGCA CGATCACGCA GTACTTCCTC AACTACATGA CGACGTTTGC ATTGACCGAG CTGCATTTGC CGGGGGGCGT CGCGATGCTC GCCACGTTCG TGACAGGCGC GGCGCTCGCG GTGGGCGCGC TCGCGGGCGG CAGCCTGTCG GATCGCGTCG GACGCCGCGC GATCCTGATC TGGCCGCGCG TGCTGCTGTT GCTGCTGCTC TTTCCAGCGT TGCAACTGAT CGTGTCGCGT CCGACGCCCG CCGTGTTCCT CGCCACGCTG ACCGTGCTGT CCGGCCTGCA CGGCATGAGC GGCGCGGCGC TCATCGTGCT GATCGCCGAG AGCTTTCCGC AGCGCGTGCG CTCGACGGGA TTCTCGATCG TCTACGCCGT CGCGGTGTCG TTGTTCGGCG GCACCGCACA GAGCATCGTC ACCTGGCTCA TCGGCACCAC CGGCAACCCG ATGGCGCCGA GCGGCTATCT GCTTGTCGCG AACGCGATCT GCATCGCGGC GGGATGGCTT GCCGCCGAGA CCCGGCCGGG CGGGCGCGGC ACGCGCTAG
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Protein sequence | MSRRRGVRDR YRRRFDRGRF MKDPLESACP PAPGCGAGAD GAACAAAMAG MAGVDGVDGA DAARADARRD VAAVALGNAI EFFDFGAYAT FAVMIGRTFF PTQRPFVSLL LSVSVFGLGF VVRPLGALVI GAYADRAGRK PAMTLTLAMM AVGTGAIAVL PGYETIGVAA PILLVVTRLI QGLAWGGEAG PATTYILEAA PPERRAAYAC WQVATQGFAA VAAGLAGYAL TLALPEAELD AWGWRVPFAL GLLVLPVGVY IRRRLSDTID PRHAYCTTRE ILRELNARHR RPIAIGLMIL LGSTITQYFL NYMTTFALTE LHLPGGVAML ATFVTGAALA VGALAGGSLS DRVGRRAILI WPRVLLLLLL FPALQLIVSR PTPAVFLATL TVLSGLHGMS GAALIVLIAE SFPQRVRSTG FSIVYAVAVS LFGGTAQSIV TWLIGTTGNP MAPSGYLLVA NAICIAAGWL AAETRPGGRG TR
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