Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0709 |
Symbol | lysA |
ID | 3689822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 719711 |
End bp | 720907 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637727165 |
Product | pyridoxal-dependent decarboxylase family protein |
Protein accession | YP_332123 |
Protein GI | 76810875 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.104928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACTG ACACGATCGG ATCCGCGCCG CACGCCGCGG CCGACGCCGG GAACGCCGAA TGGCTCGACG GGCTCGACAC GCCCTGCTAC GTGTTCGACC CGCAATGCGT GCTCGCCGGC TACGCCGCGC TGCGCGCGGC GCTCGGCACG CGCCTCGTCG TGTCGCTGAA GGCGAACTCG CATGCGGACC TGTTCCTGCG CTGCGCGCAC GCGTTCGAAG ACGGCATCGA GCTCGCGAGC CAGGGCGAGC TCGACACCGT CGTCGGGCGC GGCAAGCACG TGAAGTACCT GAACAACCCG GCGATGGGCG ATGCGCTGAT GCGCGCGGGC ATCGCGTCGC GCTGCCATTT CATCCTCGAC GGGCCGGACA TGGTGCGCCG CTTCATCGCG CTCGCGTCCG GCAAGGAGAC CGAGGACGTG ATGCTGCGCA TCAACGCGGG CGCGCTGCTC GGCGCGCACG CGCCGAAATC GCTGCGCGAC CATTTCGGCA TGACGCCCGC GGAGGCGCTC GGCATGGCGA ACCTGCTCAC GCAGGCGGGC CGCCGCGTGG CGGGGCTGCA CGCGTTCGTC GGCTCGGGCA ATTTTCGCGC CGGCCCGACG AAGGGCGGCG ACGCGGATTC GGCCGATCTC GCGTGGGCGC TCGCGCAGCT CGCCGAGCAG ATCGAGGCGC TCGTGCGCAC GCCCGTCACG CATCTGAACC TGGGCGGCGG GTTTTCGGAA AAAGGCCACG ACGACGCCAC CTTCGAGCGC TACCGCGCGC GCATCGCCCC GCTCGCGAAG CGCTACACGC TCGTGCACGA AGCGGGCCGC GCGATCTTCG CGAACGCGGG CGTGTTCGTC ACGCGCGTGC GCGCGGTCAA GGTCTGGGAC GACCGCGTGA TCGCCGTGTG CGACGGCGGC ATGAGCCACA ACTTCCTGCT CGCGAAAACG GAAGCCGTCC TGAAGACCTG GGCGGCGCCG ACGCTCGTGC CGGCCGGCGC CGCCGACGCG CATCGTGCGC CGAACGTGCG GCCGATCACG TTCGTCGGCA ACACCTGCAA CCGCGCCGAC GTGATCGGCC GGCTCGAGCG TCATCCGCGG CTGCCGCAGC CGGGCGACTT CGTCGTGTTC TCGCAATGCG GCGCCTATCA CCACTCGTAC ACCGTGAGCG GCTTCCTGTC GCACAAGCCG GCTCAAGTCT ACATCCGTCA GGCATGA
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Protein sequence | MNTDTIGSAP HAAADAGNAE WLDGLDTPCY VFDPQCVLAG YAALRAALGT RLVVSLKANS HADLFLRCAH AFEDGIELAS QGELDTVVGR GKHVKYLNNP AMGDALMRAG IASRCHFILD GPDMVRRFIA LASGKETEDV MLRINAGALL GAHAPKSLRD HFGMTPAEAL GMANLLTQAG RRVAGLHAFV GSGNFRAGPT KGGDADSADL AWALAQLAEQ IEALVRTPVT HLNLGGGFSE KGHDDATFER YRARIAPLAK RYTLVHEAGR AIFANAGVFV TRVRAVKVWD DRVIAVCDGG MSHNFLLAKT EAVLKTWAAP TLVPAGAADA HRAPNVRPIT FVGNTCNRAD VIGRLERHPR LPQPGDFVVF SQCGAYHHSY TVSGFLSHKP AQVYIRQA
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