Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0488 |
Symbol | |
ID | 3688488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 495316 |
End bp | 496563 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637726944 |
Product | glycosyl transferase, group 2 family protein |
Protein accession | YP_331902 |
Protein GI | 76812014 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCGC TCGCGTGGCT CACCGGCGCG GTCCTTGCGC TGCTCGCGGC CGAGCTGATC TCGTTCGGCG ACATCGGCCG CTTCGTCACG CTGCTCGCCG CGTTGCTCGC CGCGCCATGC GCGCTCGCGG CCGCGTTCGG CTGCGTGTAC ACGCTCGTCG CCGCCGCGCT CACGCACCGT TTTTTCGCGC GTGCGCCACG CGAGCCGCAC GCGTGCCCGC CCGTCACGAT CGTCAAGCCG TTGCACGGCG TCGAGCGGAC GCTGTTCGCG AACCTCGCGA GCTTTTGCGA GCAGCGCTAC GACGGGCCGA TCCAGTTCCT GTTCGGCGTG CACGATCGCG ACGATCCCGC GCTGCGCGCC GTCGACGCGC TGCGCACCGC GTTTCCCCGC GCGCACGTGA CGATCGTCGC CGACGCCCGG CTGTACGGGC CGAACCGCAA GATCGCGAAC CTCGTCAACA TGCTGCCCGC CGCCGCGCAT GACGTGCTGA TCTTCGCGGA CAGCGACGTG AGCGTCGGCC CCGACTACGT GCGGCATATC GTCGGCGAGC TCGGCGAGCC GGGCGTCGGG CTCGTGACCT GCGTCTATCG CGGCCGCCCG GACCCGGGCT TCTGGCCGCG CGTCGAGGCG CTCGTCACCA GCCATCAGTT CCTGCCGGGC GTGGTGACGG GCCTCGCGCT GAAGCTCGCG CGGCCGTGTT TCGGCCAGAC GATCGCGATG CGCCGCGCCA TGCTCGACGC GATCGGCGGC CTCGCGCAGT TCGCCCATCA CCTCGCCGAG GATCACGCGA TCGGCGAAGC CGTGCGCGCG CGCGGCGCGC GCGTCGTCGT GCCGCCGTTC GCGGTCGAGC ACGGCTGCGT CGAGACGCGC GTCGCGCAGC TCGTCGAACA CGAATTGCGC TGGAGCCGCA CGATCCGCGC GGTCGACCCG CGCGGCCATC TGGGCTCGCT GCTCACGCAT CCGCTCGCGC TCGCGCTGCT CGCCGGCGTG CTGTCGAGCG GCGCCGCGTG GGCGTGGCCG CTCGTGCCTG CCGCGCTCGT CGCGCGCGTC GCCGCGAAAC GCATCGTCGA TCGCGCGACG AAGCGGCCGG TGCGCGACCT GTGGCTGCTG CCGCTCGCGG ATCTGATCGC CTTCGGCATC TTCGTCGCGA GCTTCTCGTC GTCGCGCGTG ATCTGGCGCG GCTTCAGCTT CGACGTCGAT CGCGACGGCC GCCTGTGCCC CACGCCGGAA AAACGCCCGA ATGCCTGA
|
Protein sequence | MKALAWLTGA VLALLAAELI SFGDIGRFVT LLAALLAAPC ALAAAFGCVY TLVAAALTHR FFARAPREPH ACPPVTIVKP LHGVERTLFA NLASFCEQRY DGPIQFLFGV HDRDDPALRA VDALRTAFPR AHVTIVADAR LYGPNRKIAN LVNMLPAAAH DVLIFADSDV SVGPDYVRHI VGELGEPGVG LVTCVYRGRP DPGFWPRVEA LVTSHQFLPG VVTGLALKLA RPCFGQTIAM RRAMLDAIGG LAQFAHHLAE DHAIGEAVRA RGARVVVPPF AVEHGCVETR VAQLVEHELR WSRTIRAVDP RGHLGSLLTH PLALALLAGV LSSGAAWAWP LVPAALVARV AAKRIVDRAT KRPVRDLWLL PLADLIAFGI FVASFSSSRV IWRGFSFDVD RDGRLCPTPE KRPNA
|
| |