| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A3116 |
|---|
| Symbol | |
|---|
| ID | 4906065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 3031650 |
|---|
| End bp | 3033218 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640146219 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001077145 |
|---|
| Protein GI | 126455532 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2143] Thioredoxin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG CGATTCGAAA GCTGGCGGCG TCGCTGCTCG TCGCCGCCGC GGCCGCGTGC
TTCGCCGCCG ATGCGCCGCA CGCGCCCGAG CATCTGCCGC CCGGCATCGC GTGGCGGCAA
GGCGATGTCG ACGCCGCGTT CGCCGAGGCG AAGCGCACGA ACAAGCCGCT GTTCCTCTAC
TGGGGCGCGG TCTGGTGCCC GTCGTGCAAT CAGGTGAAAT CGACGATCTT CAGCCAGCAG
GCGTTCAAGT CGCGCTCGTC GTTCTTCGTG CCGGTGTATC TCGACGGCGA CACCGAGAAC
GCGCAGAAGA TCGGCGATCG CTTCAAGGTG CGCGGCTATC CGACGATGAT CCTGTTCCGG
CCGGACGGCA CCGAGGTCAC GCGGCTGCCG GGCGAAGTCG ATCTCGACCG CTACATGCAG
GCGCTGTCGA TCGGGCTGAA CGCGTCGCAT CCGTTCAAGC AGACGCTCGC CGCCGCGCTG
AAGGACGGCG CGCGCGTCAC GCCCGACGAA TGGCGCGTGC TCGCCGATTA CTCATGGGAT
ACCGACGGCG ATCTGCCGGT GCCGGGCGAG CGCGTCGCGG CGACGCTGCA GGCGCTTGCC
CGCCATGCGC GCGCGGACCA TGCGAACGCG CAGGCGCTGC GGCTCGATCT GAAGGCGGCC
GTGTCGGCGG CGGCGGGCGA CCCGCCGCAG CAGGGCGACG TCGACAAGGC GGCCGCCGCC
GCGGCCGTGC GCGATGCGCT GCGTGATCCG AAGCGCGCCC GCGCCGATTA CGATGTGCTC
GTCGCGGCGC CTGCCGAGGT CGTCGCGTAT CTGGCGGGCG GCGACGCGGC GGCGCGCGCG
TTGCTCGCGA AGCAGTACGA CGCGGCGCTC GCGCGGCTAT CGACCGACGC CTCGCTGGCC
GCGATCGATC GCACGATGGC GCTGCATGGC CGCGTGCGCG TCGCGCGGCT CGATGCGAGG
CCGGGCGCGC CGCTGCCGCC CGCGCTTGCC GACGCGGTGC GGCGGCAGAC GGCATCGGCG
GTGACTGAAT CGACGAACGT TTATGGGCGG CAAGCCGTCG TCAGCGAGGC CGCCGACACG
CTGACCGACG CCGGCCAGTT CGATGCGGCC GACGCGCTGT TGAAGGCGGA GCTCGTGCGT
TCGCCGACGC CGTACTACTT CATGTCGGGG CTCGCCGCGA ACGCGAAGGC GCGCGGCGAT
CGCGCGGCGG CGCTCGACTG GTACAGAAAG GCGTATGAGG CGGCGAGCGG CCCGGCGACG
CGGCTGCGCT GGGGCGCGGC GTACTTCGCG AACGCGGTCG ATCTCGCGCC GGACGATGCC
GCGCAGATCC GCCGGATCGC GAACGACGTG CTGACGCAGG CGAGCCAGAC GCGCAACGCG
TTCTACGGCG CGAACCGGCG GGCGCTCACG CGCGTCGTCA CGCAGCTCGC GCACTGGCGG
CAGCGCGGCG CGCACGATGC GGCGGCGCAG GCGGTGGTCA AGCAGTTCGA GGGCGTGTGC
GGGAAACTGC CGGTGGGCGA TCCGCAGGTC GGCACCTGCG AGGGCTTGCT CAAGACGGCG
AAGGCTTGA
|
|---|
| Protein sequence | MKTAIRKLAA SLLVAAAAAC FAADAPHAPE HLPPGIAWRQ GDVDAAFAEA KRTNKPLFLY
WGAVWCPSCN QVKSTIFSQQ AFKSRSSFFV PVYLDGDTEN AQKIGDRFKV RGYPTMILFR
PDGTEVTRLP GEVDLDRYMQ ALSIGLNASH PFKQTLAAAL KDGARVTPDE WRVLADYSWD
TDGDLPVPGE RVAATLQALA RHARADHANA QALRLDLKAA VSAAAGDPPQ QGDVDKAAAA
AAVRDALRDP KRARADYDVL VAAPAEVVAY LAGGDAAARA LLAKQYDAAL ARLSTDASLA
AIDRTMALHG RVRVARLDAR PGAPLPPALA DAVRRQTASA VTESTNVYGR QAVVSEAADT
LTDAGQFDAA DALLKAELVR SPTPYYFMSG LAANAKARGD RAAALDWYRK AYEAASGPAT
RLRWGAAYFA NAVDLAPDDA AQIRRIANDV LTQASQTRNA FYGANRRALT RVVTQLAHWR
QRGAHDAAAQ AVVKQFEGVC GKLPVGDPQV GTCEGLLKTA KA
|
|---|
| |