| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2815 |
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| Symbol | rafA |
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| ID | 4904231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2753383 |
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| End bp | 2755593 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640145918 |
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| Product | alpha-galactosidase |
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| Protein accession | YP_001076844 |
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| Protein GI | 126458096 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGGCCT CACGATGGGG GCCACCAAGG GCTAGACGTA TGTTCGACAC AAAACTTATT
CGATTGACTG GTTCAAATCT CAGCATCGCA CTAGAGAAAT CGGCCGATAT GCCGCCTGTA
TGGCGCTATT TTGGCGCAAA ATTAGAACCG CACGCCATCG CCTGGAGCGC AGACGACGTG
CGACCGCACC CTCCGACGTT ACTCGACGGC GATCCGCCCT TCACGGCATT CTCGACACAC
GGATTCGGCT GGTTCCATCA ACCGGCACTC GTCGGCAGCC GGCCTGGAGA CGTTGGCGAT
ATTGACTGGG CACAGAGCTT TCGCCTTGAT GAGGTAAGCA CAAACGATCA CTCGGTAACA
ATGAAGTTGA GCGACGAACA GGCCGAGTTG GGTGCAATCC TTAGTTACAC AATCGATCCT
GCGTCGGACG TCATAACGAT GTGGGCTGAA TTAGAGAACC GCGGCGCGAC TCCATTCCGT
GTAGATTGGC TAGCCGCCGC CACTGTACCG CTGCCGCCCG ACGCAAATCG GGCACTGAGC
TTCTCGGGGC GCTGGACGCT GGAGTTCCAG GAAAATCGTG AAATTCTCGG TTCTGCGACG
TGGAGGCGCG ACAACCGACG CGGGCGCACT TCTCACGACT CGTTTCCGGG AGTCATGGTC
GGCTCATCGC TAGCGGACAA TGTGGGCACC GTATACGGCG CGCATTTGGG ATGGAGTGGA
AACCACACCA TCATCATCGA ACCGATGACC GATGGTCGCC GGCAACTGCA ATTGGGGGAA
TGGTTGGCAC CGGGCGAAGT CGTGCTTGCA CCGGACCAAC GCTATCGCAC ACCATGCGCC
TTTCTTTCAT ACAGCGAGCA GGGCCTGAAT GGCTTGAGCG CGCAGTTCCA CCGCTTCGTT
CGGGCGAAGG TACTGCGCTG GCCACGGCAA CGCATGCAAC CTCGGCCGGT GATCCTCAAT
ACTTGGGAAG CCGTATATTG CGATCACGAT CTCGAGGATC TCAAGGAACT GGCGACTGCG
GGGGCGCAGA TCGGCATCGA ACGTTTCGTT CTCGACGACG GCTGGTTCCA TTGCCGCGAC
AACGATCGCG CCGGACTAGG CGACTGGTGG CCCGATGCGA ACAAGTACTC TCGCGGGCTC
ACACCACTCA TCCATCACGT TCGAGATTTG GACATGGACT TTGGCCTATG GATCGAACCC
GAAATGGTCA ATCCGGACAG CGAATTGTAC CGCGCCCGCC CGGAGTGGAC GCTTCGGCTC
GACGGTCGGC CACTCGTGAC AGGTCGCAAT CAGCTCGTAC TGGACCTCGC GGAACCAGAT
GTGCGCGAAT ATCTCTTCAC GCAAATCAGT GCTTTATTGC GCGACAATGC GATTTCCTAT
CTCAAATGGG ATATGAACCG AGATCTCGCC ACGGCTGGCC ATCGTGGCAT GCCCGCTTAC
AGGCGTCAGA CCCAGGCGTT TTATGCGTTG CTCGATCGGT TGCGCGCCGC GTTTCCTGCT
GTGGAGATCG AGAGTTGCGC CTCCGGGGGC GGACGAGCCG ATTACGGCGT GTTGGCTCGC
ATGCACCGTC TCTGGACGAG CGACTGCAAT GACGCGCTCA CGCGCATCGG AATTCAGCGC
GGCTTTCTGC GTTTCTTTCC TCCCGAGCTC ATGGGTGCAC ATATCGGGGC CGATCGTTCC
CACACGACCG GACGCCGGCA CACTCTTGCT TTCAGAGCCG CAGTCGCACT TTTCGGTCAC
CTTGGCGTTG AAGTCGACCC GAGAGCAATG CCCGCCGACG AGATCGAAGC CCTCATGCGC
TGGATTGCAA TATACAAGGA ATGGCGGCCC GTTCTACATG CGGGAACCCT TCACCAGGGG
TGTGTCAGCG AGGCGCTCTC TTGGACTCAA GCTGTCTCCG ATGACGGAAG TACGTCGCTT
TTGGCGATCT ATCGACTACG CGAGGACAAC GCGCGATACG CCACACCACT CAAGATCAAG
GGACTGAGAT GCGACATCGC CTATCGAGTA CAAACGCTCT ACGCACCTGT CGCACCACAT
TTCGTGAAGC AAACGCAAAT GTTCAAGATG ATGCAGAACG AAGGCGTGGT GATTTCGGGC
GCAAGTTTGC TGGAGTTAGG GATGCCAATT CCTCCCATGC CGCCCGAATC CGCCGTTGTG
ATTTCGCTAA AACCCGCCTC GGAGTTATCC AAGCCGCTTG ATCTGTATTA A
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| Protein sequence | MQASRWGPPR ARRMFDTKLI RLTGSNLSIA LEKSADMPPV WRYFGAKLEP HAIAWSADDV
RPHPPTLLDG DPPFTAFSTH GFGWFHQPAL VGSRPGDVGD IDWAQSFRLD EVSTNDHSVT
MKLSDEQAEL GAILSYTIDP ASDVITMWAE LENRGATPFR VDWLAAATVP LPPDANRALS
FSGRWTLEFQ ENREILGSAT WRRDNRRGRT SHDSFPGVMV GSSLADNVGT VYGAHLGWSG
NHTIIIEPMT DGRRQLQLGE WLAPGEVVLA PDQRYRTPCA FLSYSEQGLN GLSAQFHRFV
RAKVLRWPRQ RMQPRPVILN TWEAVYCDHD LEDLKELATA GAQIGIERFV LDDGWFHCRD
NDRAGLGDWW PDANKYSRGL TPLIHHVRDL DMDFGLWIEP EMVNPDSELY RARPEWTLRL
DGRPLVTGRN QLVLDLAEPD VREYLFTQIS ALLRDNAISY LKWDMNRDLA TAGHRGMPAY
RRQTQAFYAL LDRLRAAFPA VEIESCASGG GRADYGVLAR MHRLWTSDCN DALTRIGIQR
GFLRFFPPEL MGAHIGADRS HTTGRRHTLA FRAAVALFGH LGVEVDPRAM PADEIEALMR
WIAIYKEWRP VLHAGTLHQG CVSEALSWTQ AVSDDGSTSL LAIYRLREDN ARYATPLKIK
GLRCDIAYRV QTLYAPVAPH FVKQTQMFKM MQNEGVVISG ASLLELGMPI PPMPPESAVV
ISLKPASELS KPLDLY
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