Gene BURPS1106A_A2645 details

Gene Information

• Locus tag: BURPS1106A_A2645
• Symbol: atpA
• ID: 4903302
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: -
• Start bp: 2586317
• End bp: 2588317
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 640145748
• Product: F0F1 ATP synthase subunit alpha
• Protein accession: YP_001076675
• Protein GI: 126455868
• COG category: [C] Energy production and conversion
• COG ID: [COG0056] F0F1-type ATP synthase, alpha subunit
• TIGRFAM ID: [TIGR00962] proton translocating ATP synthase, F1 alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.727067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCCGA CGCCTGACGC ACCCGCCGCC GCCGATGCCG ATGCCGCAAC CGGCGCCGGC 
TGGCTCGCGC GCCGCCGGGG CGCACTCGCG CGCGTCGCGC TCGCGCCCGT CGCGCAGGCG 
ATCGGGCGGG TCGAGCGCGT CGCGGACGGG ATCGCGTTCG TGTCCGGTCT CGAAGACACG 
ATGCTCAACG AAGTGCTGCG TTTCGAAGGC GGCGTGACCG GCTTCGCGCA TACGCTCGAT 
GAGGATCTGA TCAGCGTCGT GCTGCTCGAT CCGGACGCGG GCGTTCGCGC GCAGACGGCG 
GTCGCGCGCA CGGGCGCGGT GCTCGAAGTG CCGGCCGGGC CGCAACTGCT CGGGCGCGTG 
GTCGATCCGC TCGGCCGCCC GCTCGACGGC GGCGCACCGC TCGATGCGGC GCACACGCTG 
CCGATCGAGC GCGCCGCGCC GGCGATCATC GAGCGCGATC TCGTCAGCGA GCCGCTCGAC 
ACCGGCGTGC TGATCGTCGA CGCGCTCTTC ACGATCGGGC GCGGCCAGCG CGAGCTGATC 
ATCGGCGATC GCGCGACCGG CAAGACCTCG CTCGCGATCG ACGCGATCGT CAACCAGCGG 
CATTCGGACG TGATCTGCGT GTACGTCGCG ATCGGCCAGC GCGCGAGCGC GGTGCGCCGC 
GTGATCGACG CGGTGCGCCG CTACGGCGCG CCCGAGCGCT GCGTCTTCGT CGTCGCGCCG 
GCCGCGTGCG CGCCGGGGCT GCAGTGGATC GCGCCGTTCG CGGGCTTCTC GATCGCCGAA 
TATTTCCGCG ACCGCGGCCA ACACGCGCTC GTCGTCGTCG ATGACCTGAC AAAGCATGCG 
GCGACGCACC GCGAGCTCGC GCTGCTCACG CGCGAGCCGC CCGGCCGCGA GGCGTATCCG 
GGCGACATCT TCTACGTGCA CGCGCGCCTG CTCGAACGCG CGGCGAAGCT GTCGGCGGCG 
CTCGGCGGCG GATCGCTGTC CGCGCTGCCG ATCGCGGAGA CCGATGCGGG CAACCTCGCC 
GCCTACATTC CGACGAACCT GATTTCGATC ACCGACGGGC AGATCGTGCT CGATTCGGCG 
CTGTTCGCCG CGAACCAGCG GCCGGCCGTC GACGTCGGGC TGAGCGTGAG CCGCGTCGGC 
GGCAAGGCGC AGCATCCGGC GCTGCGCGCC GCGTCGGGCC GCCTGCGGCT CGACTATGCG 
CAGTTCCTCG AGCTGGAGGC GTTCACGCGC TTCGGCGGGC TCACGGACGC GCGGCTGCGC 
GCGCAGATCA CGCGCGGCGA GCGCATTCGC GCGTTGATCA CGCAGCCGCG CTTTCGCGCG 
CTGCGCACGC TCGACGAAGT GGTGCTGCTC AAGGCGCTCG CGGCGGGCGC GCTCGATGCG 
ATGTCGCCGG ATCTCGTCGC GCCGCTGCGC GAGCGCTTGC CTGCGTGGCT CGATGCGCGG 
ATCGCGGCGC TCACGCCGGC GCTTGCGCCG CCGCGCGACT GGCTTGCGGA CGATGCGGCG 
CTCGACGCGC TCGCGGAATC GGTCGGCGAG CTGATCGAGC GGATCGCCGC GGACGCCGCG 
CGTCGCGCGA CGGCGGGCAT GCCGGCGGAG GACGCGGCGG GCGACATCGG CGGCGCGTTC 
GGCGGCGAGC AGGCGCGCGG CGATGCGGAT CGTGATGCGG ATCATGGCGC GAATCGCGAG 
GTCAGTCGCG AGGTCAGTCC CGAGGCGAGT CGCGAAGTGA GCCGTGAAGT GAGCTGTGAA 
GTGAGCCACG AGGCCGATCG AGACGCGGCC GCCGATGCGG CGCGCGTCGC CGGTCGGGCG 
CCCGGGCGCG CCGAGCCGGA TCGCGCGGCC CCACGCGCGA TGCCCGACGG GCCGCCGCGC 
GCGCAGGCCG ACGGCGATCG CGCATCGGCG TCTCGGCCGC GGCCCGATGC GCGCGGCGAC 
GCGGCGCGCA CCGCACCGTC TCCGCAAGGC GGTGCCGACG CCAACGTCGA TGCCGAAGCC 
GAAGCGAGGC ACAAGCGATG A 

 

Protein sequence

MTPTPDAPAA ADADAATGAG WLARRRGALA RVALAPVAQA IGRVERVADG IAFVSGLEDT 
MLNEVLRFEG GVTGFAHTLD EDLISVVLLD PDAGVRAQTA VARTGAVLEV PAGPQLLGRV 
VDPLGRPLDG GAPLDAAHTL PIERAAPAII ERDLVSEPLD TGVLIVDALF TIGRGQRELI 
IGDRATGKTS LAIDAIVNQR HSDVICVYVA IGQRASAVRR VIDAVRRYGA PERCVFVVAP 
AACAPGLQWI APFAGFSIAE YFRDRGQHAL VVVDDLTKHA ATHRELALLT REPPGREAYP 
GDIFYVHARL LERAAKLSAA LGGGSLSALP IAETDAGNLA AYIPTNLISI TDGQIVLDSA 
LFAANQRPAV DVGLSVSRVG GKAQHPALRA ASGRLRLDYA QFLELEAFTR FGGLTDARLR 
AQITRGERIR ALITQPRFRA LRTLDEVVLL KALAAGALDA MSPDLVAPLR ERLPAWLDAR 
IAALTPALAP PRDWLADDAA LDALAESVGE LIERIAADAA RRATAGMPAE DAAGDIGGAF 
GGEQARGDAD RDADHGANRE VSREVSPEAS REVSREVSCE VSHEADRDAA ADAARVAGRA 
PGRAEPDRAA PRAMPDGPPR AQADGDRASA SRPRPDARGD AARTAPSPQG GADANVDAEA 
EARHKR