Gene BURPS1106A_A2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A2177 
Symbol 
ID4903825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp2131597 
End bp2133387 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content79% 
IMG OID640145282 
Producttype II/III secretion system family protein 
Protein accessionYP_001076210 
Protein GI126457995 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCGGC GCGCGGCCGC ATCGGCTGCC GCCGTCGCGC TCGCGCTCGC GAGCCATGCG 
GCGGCGCTGC GGGCGGTGCC GCTCGCGTGG CCGCTCGCGC GTTTCGACTA TCGCGTCGGC
CCGGTGAACG CCGCCGATGC ATTGGGCGAG CTGAGCCGCC GCTCGGGCAT CGCCATCGAC
GTCGACGCGC GCGCGCCGTG CCGGCTCGAC GTGCGCGAGG CGCTGCCGCC GCGGCGCTTC
GTCGAGCGGC TCGCGCGCAC CTGCGGGCTC GTGTCGTACT ACGACGGCGC GGTGTTGCAG
CTCGTCGCGC CCGACGCGTT CGAGCACGCG GCGGTGCGGC TCAATTACGC GACGCTCGCC
GAGCTGCGCG CGGCGCTCGC GCGGCAGCGG ATCGTCGACG CGCGCTGGCG GCCCGGCTAT
GACGACGCGG CGCGGATCGC ACGCGTCGCC GGCCCGCCGC GCTATGTCGC GCTCGTGCTC
GCCGCCGCGC GCGCGCTCGA CGAGGCCGCG CAGACGCGCG TGCGCACCGA GACGCGCGCG
TTCCGGCTGC GCGCGCGCGC GGCGGCCGAC CGCGTCGTGC GCGGCGATGG CGACGGCGAC
GATGCGGTGC TGCCCGGGCT CGCGACGCGA CTGCGCCGCC GGCTCGAGCA GGACGGCGCC
GCGCCGCGCG CGGTGCCGGG CGTGCGCGAA TTCACCGCAT CGTTGCCGAT CGTCGACGCG
GACGCACGCT CGAACACCGT GCTGATCCGC GACGTGCCCG CACGGCTCGC GCGCGACGCG
CGGCTCGTCT CGCAGCTCGA TACGCGGCCC GCGTCGATCC GGATCGACGC GTTCGGCGCA
ACGCTCGCGC CCGCGCAGCT CGACGCGCTC GGGCTGCGAT GGCGCGACGG CGCGCCGGCT
TCGGGCGCGT CGCGCGATGC GGGCGTCGCG CGCGACGGTT CGCGTGCGTC GGTGGGCGTC
CGGCCCGTGG GCGCGTCCCG CCCGTCCGGC GCGCGGAACG AGGCGGCCGC GGCGGAGGCG
CGGCGTGCGC CCGCGGTGTC TGCCGCACCC GACGCGTCGG GCGCATCCGG CCCATCCGGC
CCATCCGCCG CCTCAGGCGC TCCCGACGCC GTCGACGCGT CCGCCGGCTC GGCCGACTCT
CCCCGCGCAT CCGCGGTGCG CATCGCGATC GTGTCCACGC CTGCCGGCTG CGCGCCGGTG
CGCGCGCGCA TCGCCGAGCT TGCCGCGCAC GGCGACGCGT CGATCGACGC CGACGACTCG
ACGCTGGCGC TTCCCGATAG CCGCGCGGAT TTCGGCCGGC TGCGGCTGTC GTTCGTCGCG
TCGGGCGATG GCGACGCGCG CGCGCTCGAT GCGCGGCGCA ACGGTTTCGC GATGCGGGTC
ACGCCGCACG AGACCGCGCA GCCGGCGCGC TACGCGCTCG ACATACGGAT CGTCGAGCGT
CGGGCCGACG GCGACGCGGC CGGCGCGTCG TCGCGCGAAA CCGTGGCCGG CGTGACGCTC
GCGGCGGGCG AGTGCGCGGC GCTCGCGCTG CCGTCGGCCG CGCACGGCGA GCAGCGGCTC
GTGCTGGTGA TGCCGCGAGC GGTGCCGGCC GATCCGGCGC GCTTGCCGCC GCAGGCCTCG
CCGAACGCGC CGGCGGCCGC GGCCGTCGCC GCCAACGCAC GGGGGCCCGA CGCCGCCGAG
CCCGCGGCGC GCGCGCAGGC GGCCGCGCGC GCGCATCCGC CGGCGGCGCC GCTGCCTTCG
CCGTCCGCCG GCCTCGGCTT GCGGGCGCAG ACCCGCCTGC TCGGCAATTG A
 
Protein sequence
MTRRAAASAA AVALALASHA AALRAVPLAW PLARFDYRVG PVNAADALGE LSRRSGIAID 
VDARAPCRLD VREALPPRRF VERLARTCGL VSYYDGAVLQ LVAPDAFEHA AVRLNYATLA
ELRAALARQR IVDARWRPGY DDAARIARVA GPPRYVALVL AAARALDEAA QTRVRTETRA
FRLRARAAAD RVVRGDGDGD DAVLPGLATR LRRRLEQDGA APRAVPGVRE FTASLPIVDA
DARSNTVLIR DVPARLARDA RLVSQLDTRP ASIRIDAFGA TLAPAQLDAL GLRWRDGAPA
SGASRDAGVA RDGSRASVGV RPVGASRPSG ARNEAAAAEA RRAPAVSAAP DASGASGPSG
PSAASGAPDA VDASAGSADS PRASAVRIAI VSTPAGCAPV RARIAELAAH GDASIDADDS
TLALPDSRAD FGRLRLSFVA SGDGDARALD ARRNGFAMRV TPHETAQPAR YALDIRIVER
RADGDAAGAS SRETVAGVTL AAGECAALAL PSAAHGEQRL VLVMPRAVPA DPARLPPQAS
PNAPAAAAVA ANARGPDAAE PAARAQAAAR AHPPAAPLPS PSAGLGLRAQ TRLLGN