Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2177 |
Symbol | |
ID | 4903825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2131597 |
End bp | 2133387 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 640145282 |
Product | type II/III secretion system family protein |
Protein accession | YP_001076210 |
Protein GI | 126457995 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGCGGC GCGCGGCCGC ATCGGCTGCC GCCGTCGCGC TCGCGCTCGC GAGCCATGCG GCGGCGCTGC GGGCGGTGCC GCTCGCGTGG CCGCTCGCGC GTTTCGACTA TCGCGTCGGC CCGGTGAACG CCGCCGATGC ATTGGGCGAG CTGAGCCGCC GCTCGGGCAT CGCCATCGAC GTCGACGCGC GCGCGCCGTG CCGGCTCGAC GTGCGCGAGG CGCTGCCGCC GCGGCGCTTC GTCGAGCGGC TCGCGCGCAC CTGCGGGCTC GTGTCGTACT ACGACGGCGC GGTGTTGCAG CTCGTCGCGC CCGACGCGTT CGAGCACGCG GCGGTGCGGC TCAATTACGC GACGCTCGCC GAGCTGCGCG CGGCGCTCGC GCGGCAGCGG ATCGTCGACG CGCGCTGGCG GCCCGGCTAT GACGACGCGG CGCGGATCGC ACGCGTCGCC GGCCCGCCGC GCTATGTCGC GCTCGTGCTC GCCGCCGCGC GCGCGCTCGA CGAGGCCGCG CAGACGCGCG TGCGCACCGA GACGCGCGCG TTCCGGCTGC GCGCGCGCGC GGCGGCCGAC CGCGTCGTGC GCGGCGATGG CGACGGCGAC GATGCGGTGC TGCCCGGGCT CGCGACGCGA CTGCGCCGCC GGCTCGAGCA GGACGGCGCC GCGCCGCGCG CGGTGCCGGG CGTGCGCGAA TTCACCGCAT CGTTGCCGAT CGTCGACGCG GACGCACGCT CGAACACCGT GCTGATCCGC GACGTGCCCG CACGGCTCGC GCGCGACGCG CGGCTCGTCT CGCAGCTCGA TACGCGGCCC GCGTCGATCC GGATCGACGC GTTCGGCGCA ACGCTCGCGC CCGCGCAGCT CGACGCGCTC GGGCTGCGAT GGCGCGACGG CGCGCCGGCT TCGGGCGCGT CGCGCGATGC GGGCGTCGCG CGCGACGGTT CGCGTGCGTC GGTGGGCGTC CGGCCCGTGG GCGCGTCCCG CCCGTCCGGC GCGCGGAACG AGGCGGCCGC GGCGGAGGCG CGGCGTGCGC CCGCGGTGTC TGCCGCACCC GACGCGTCGG GCGCATCCGG CCCATCCGGC CCATCCGCCG CCTCAGGCGC TCCCGACGCC GTCGACGCGT CCGCCGGCTC GGCCGACTCT CCCCGCGCAT CCGCGGTGCG CATCGCGATC GTGTCCACGC CTGCCGGCTG CGCGCCGGTG CGCGCGCGCA TCGCCGAGCT TGCCGCGCAC GGCGACGCGT CGATCGACGC CGACGACTCG ACGCTGGCGC TTCCCGATAG CCGCGCGGAT TTCGGCCGGC TGCGGCTGTC GTTCGTCGCG TCGGGCGATG GCGACGCGCG CGCGCTCGAT GCGCGGCGCA ACGGTTTCGC GATGCGGGTC ACGCCGCACG AGACCGCGCA GCCGGCGCGC TACGCGCTCG ACATACGGAT CGTCGAGCGT CGGGCCGACG GCGACGCGGC CGGCGCGTCG TCGCGCGAAA CCGTGGCCGG CGTGACGCTC GCGGCGGGCG AGTGCGCGGC GCTCGCGCTG CCGTCGGCCG CGCACGGCGA GCAGCGGCTC GTGCTGGTGA TGCCGCGAGC GGTGCCGGCC GATCCGGCGC GCTTGCCGCC GCAGGCCTCG CCGAACGCGC CGGCGGCCGC GGCCGTCGCC GCCAACGCAC GGGGGCCCGA CGCCGCCGAG CCCGCGGCGC GCGCGCAGGC GGCCGCGCGC GCGCATCCGC CGGCGGCGCC GCTGCCTTCG CCGTCCGCCG GCCTCGGCTT GCGGGCGCAG ACCCGCCTGC TCGGCAATTG A
|
Protein sequence | MTRRAAASAA AVALALASHA AALRAVPLAW PLARFDYRVG PVNAADALGE LSRRSGIAID VDARAPCRLD VREALPPRRF VERLARTCGL VSYYDGAVLQ LVAPDAFEHA AVRLNYATLA ELRAALARQR IVDARWRPGY DDAARIARVA GPPRYVALVL AAARALDEAA QTRVRTETRA FRLRARAAAD RVVRGDGDGD DAVLPGLATR LRRRLEQDGA APRAVPGVRE FTASLPIVDA DARSNTVLIR DVPARLARDA RLVSQLDTRP ASIRIDAFGA TLAPAQLDAL GLRWRDGAPA SGASRDAGVA RDGSRASVGV RPVGASRPSG ARNEAAAAEA RRAPAVSAAP DASGASGPSG PSAASGAPDA VDASAGSADS PRASAVRIAI VSTPAGCAPV RARIAELAAH GDASIDADDS TLALPDSRAD FGRLRLSFVA SGDGDARALD ARRNGFAMRV TPHETAQPAR YALDIRIVER RADGDAAGAS SRETVAGVTL AAGECAALAL PSAAHGEQRL VLVMPRAVPA DPARLPPQAS PNAPAAAAVA ANARGPDAAE PAARAQAAAR AHPPAAPLPS PSAGLGLRAQ TRLLGN
|
| |