| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2086 |
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| Symbol | |
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| ID | 4904522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2049868 |
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| End bp | 2050989 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640145191 |
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| Product | type III secretion regulator YopN/LcrE/InvE/MxiC |
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| Protein accession | YP_001076119 |
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| Protein GI | 126455484 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02511] type III secretion effector delivery regulator, TyeA family
[TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.350134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCGA TCATCGGCGG CGCGTCGGCC GCGCGGCGCG GCTTTTCGAT CGACGGCACG
GGGAGCGCGG CGAACCGGCT CGACGCGGAG CCGTCGCTCG ACGACGCGCC GCAGACGGGG
GCGGCGGGCG CGGCCGACGT GCAGGCGCAA CTCGCCGGCG TCGACGAGGA AGCCGCGAAC
GCCGCCGCGC AATTCGGCCG GTTCCGCGCG TCGGAGCGCA AGGGGCGGCG CAGCGACGAG
CTCGAACGGA TTCTCGACAC GGACGCCGAC GAGAAGCTCG ACGAGCTCGC CGCGCTGCTC
GGCGGCCGCG CGGCGCGCGG CCGCGCGGAC CTCGCGACGC TGCTGCGCGA CGCGCGCGAG
CGCTTTCGCG ACGAGAGCGA TCTGTTGCTC GCGCTGCGCG AGCTGCGCCG GCGGCGCCGG
CTCGACGGCG AATCCGTCGA CGCGCTCGAG CGCGCGATCG ACGAACTGCT CGCGGGCGAC
GGCGCCAAGC GGATCAAGGC GGGCATCAAC GCGGCGCTCA AGGCGAAGGT GTTCGGCGCG
CGGATGCAGC TCGATGCGCG CCGGCTGCGC GAGCTGTACC GGCAGTTCCT CGAGTTCGAC
GGCTCGCACC TCGTCATCTA CGAAGACTGG ATCGAGCAGT TCGGCGCGAG CCGCCGCAAG
CGGATTCTCG ACTACGTGAG CGCCGCGCTG TCGTACGACA TGCAGTCGCA CGATCCGAGC
TGCGGGTGCG CGGCCGAGTT CGGCCCGCTG CTCGGCACGC TGCATCGCGC GCGCATGCTC
GCGTCGGCCG ACGAGCAGTT CGTCGGCCGG CTGCTCGACG ACGCGCTCGC GCGCGATTGC
GGGCTCACCG AGGCGCGCGC GCTCGCGACG ATGCTGGGCG GCCTGCAACG GCCGTTCTCG
GTCGCCGACG TGCTGCTGGG CACGCTCGGC GATCTGCTCG AGCCGCTCGC GCCCGCCCGT
CGCTCGCAGT TGTTGCAGCT CGCGCTGCGC GCGTTCGCGG GCGTGCCGAT CGCGCTCTAC
GGCGACGCCG ACGCGCGCCG CGCGGCGCTC GGCGCGCTCG AGGAACTGAT CGGCGCGACG
TATGCGCGCG AGCGGCGGCA GGCGCGCCCG CGCGCCGACT GA
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| Protein sequence | MSSIIGGASA ARRGFSIDGT GSAANRLDAE PSLDDAPQTG AAGAADVQAQ LAGVDEEAAN
AAAQFGRFRA SERKGRRSDE LERILDTDAD EKLDELAALL GGRAARGRAD LATLLRDARE
RFRDESDLLL ALRELRRRRR LDGESVDALE RAIDELLAGD GAKRIKAGIN AALKAKVFGA
RMQLDARRLR ELYRQFLEFD GSHLVIYEDW IEQFGASRRK RILDYVSAAL SYDMQSHDPS
CGCAAEFGPL LGTLHRARML ASADEQFVGR LLDDALARDC GLTEARALAT MLGGLQRPFS
VADVLLGTLG DLLEPLAPAR RSQLLQLALR AFAGVPIALY GDADARRAAL GALEELIGAT
YARERRQARP RAD
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