Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1983 |
Symbol | |
ID | 4905676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1952822 |
End bp | 1954429 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640145089 |
Product | putative piperideine-6-carboxylate dehydrogenase |
Protein accession | YP_001076017 |
Protein GI | 126455947 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.467397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGCTTGC ATGCGGCGCG CGAACGCGGT CCAATCGATT CATTCGCGGC GGCGACGCCG CACCGATCAA CCCGATTCTG TTCTGAAGAG GAAGCGATGC AATTCAACGA CATTCTCGCC GCGCTCGACG TCGATCTGTC CCGCTGGCAA GGCCGTGCGC TGACCGCCCG CTCGCCCGTC GACGGCGCGA CGCTCGCCAC GCTCGCCGCC GACGCCCCGG CGGACGCCGA ACGCAAGATC GACGCCGCGC ATCAGGCGTT CCTCAAATGG CGCACGGTGC CCGCGCCGGT GCGCGGCGAG CTCGTGCGCG TGTTCGGCAA CGTGCTGCGC GAGCACAAGG CCGCGCTCGG CCGGCTCGTC ACGCTCGAGG CGGGCAAGAT CGCGTCCGAG GGGCTCGGCG AAGTGCAGGA AATGATCGAT ATCTGCGATT TCGCGGTCGG CCTGTCGCGG CAGCTTTACG GCCTGACGAT CGCGTCCGAG CGCCCCGGCC ACCGGATGAT GGAAACCTGG CATCCGCTCG GCGTGTGCGG CGTGATCTCC GCGTTCAACT TCCCGGTCGC CGTGTGGTCG TGGAACGCGG CGCTCGCGTT CGTGTGCGGC GATCCGGTCG TCTGGAAGCC GTCCGAGAAG ACGCCGCTCA CCGCGATCGC GTGCCACACG CTGTTTGCGA AGGCGGTGCG CGAATTCGAC AAGACGCACC CCGGCGTCGT GCCTGAAGGG CTGCATCAGC TCGTGCTCGG CGGCCGCGAT GTCGGCGAGG CGCTGTGCGC GTCGCCGAAG GTGCCGCTCG TGTCCGCGAC GGGCAGCGTG CGGATGGGCA TCGAGGTCGC GCAGGTGCTG AGCCGGCGGC TCGCGCGCAG CATTCTCGAG CTCGGCGGCA ACAACGGGAT GATCGTCGCG CCGAGCGCGG ATCTCGATCT CGTCGTGCGC GCGGTGACGT TCGCCGCGGT CGGCACCGCG GGCCAGCGCT GCACGACGCT GCGCCGGCTG ATCGTGCACC GCAGCGTCGC CGATCAACTG CTGCCGCGCC TCGAGAAGGC GTTCGCATCG GTGAAGGTGG GCGATCCGCT CGAAGCGGGC ACGCTCGTCG GCCCGCTGAT CGATCGCGCG TCGTTCGACG CGATGCAAAA GGCGCTCGGC GATGCGCGCG AGCAGGGCGG CGAGGTGAAG GGCGGCGAAC GTGTCGAGCT CGGCCGCGCG GATGCGTATT ATGTGCGCCC GGCGCTCGTG CGGATGCCGA GGCAGACGGC CGTCGTCACG CGCGAGACGT TCGCGCCGAT CCTGTACGTG CTCGTCTATG ACGACTTCGA CGAGGCGCTT GCGATCCACA ACGGCGTGCC GCAAGGGCTG TCGTCGGCGA TCTTCACGAA CGACATGCGC GAGGCCGAGC GGTTCATGTC GGCGGCCGGC AGCGATTGCG GGATCGTCAA CGTGAACATC GGCACGAGCG GCGCGGAGAT CGGCGGCGCG TTCGGCGGCG AGAAGGAGAC GGGCGGCGGC CGCGAATCGG GCTCGGACGC GTGGAAGAGC TACATGCGCC GCGCGACGAA CACGATCAAC TACAGCCGCG AATTGCCGCT CGCGCAGGGC GTGAAGTTCG ACGTGTAA
|
Protein sequence | MRLHAARERG PIDSFAAATP HRSTRFCSEE EAMQFNDILA ALDVDLSRWQ GRALTARSPV DGATLATLAA DAPADAERKI DAAHQAFLKW RTVPAPVRGE LVRVFGNVLR EHKAALGRLV TLEAGKIASE GLGEVQEMID ICDFAVGLSR QLYGLTIASE RPGHRMMETW HPLGVCGVIS AFNFPVAVWS WNAALAFVCG DPVVWKPSEK TPLTAIACHT LFAKAVREFD KTHPGVVPEG LHQLVLGGRD VGEALCASPK VPLVSATGSV RMGIEVAQVL SRRLARSILE LGGNNGMIVA PSADLDLVVR AVTFAAVGTA GQRCTTLRRL IVHRSVADQL LPRLEKAFAS VKVGDPLEAG TLVGPLIDRA SFDAMQKALG DAREQGGEVK GGERVELGRA DAYYVRPALV RMPRQTAVVT RETFAPILYV LVYDDFDEAL AIHNGVPQGL SSAIFTNDMR EAERFMSAAG SDCGIVNVNI GTSGAEIGGA FGGEKETGGG RESGSDAWKS YMRRATNTIN YSRELPLAQG VKFDV
|
| |