| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1898 |
|---|
| Symbol | |
|---|
| ID | 4904016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 1861448 |
|---|
| End bp | 1862797 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640145004 |
|---|
| Product | type III secretion system ATPase |
|---|
| Protein accession | YP_001075932 |
|---|
| Protein GI | 126455566 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.284295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG ACGAGCCCTT GCGCACGGCC GAATTCAGCC ACCTGGCGGA TGCGATCGAG
CGGGAAATTC TCGCGGTGTC GGGTGTCGTG CGCACGGGCC GGGTCCTCGA AGTGATCGGC
ACGCTGATCA AGGTGTCCGG GCTCGACGTC GCGCTGGGGG AATTGTGCGA GCTTCGAACG
CGCGAAGGCA GGCTGTTGCA ACGGGCGGAA GTCGTCGGTT TCACGCGTGA TGTGGCGCTG
CTGTCGCCGT TCTCGCAACT CGAGCAGATC TCGCGGACCA CCCAGGTGAT CGGGCTCGGC
CGTCCGTTGT CGATCCCGGT CGGCGACGCA CTGCTCGGCC GCGTGATCGA CGGCCTCGGA
GCGCCGCTCG ACGGCGGTCC GCCGCTTGCG TCGGAAACGC TGCAGCCGCT GATCGCGGCG
CCTCCCGAGC CGATGAGCCG TCGGATGATC GATGCGGCGA TGCCGACGGG CGTGCGAGTC
GTCGACGCGA TGATGGCGCT CGGGGAGGGC CAGCGCATGG GTATCTTCGC GCCGGCGGGG
GTCGGCAAGA GCACGCTGCT GGGCATGTTC GCGCGCGGCG CCGCGTGCGA TGTCAACGTT
ATCGCGCTGA TCGGCGAGCG GGGGCGCGAG GTGCGGGAAT TCATCGAACT GATTCTCGGG
CAGGCGGGCA TGGCGCGTTC CGTCGTCGTC TGCGCGACGT CGGATCGTTC GTCAATGGAG
CGGGCGAAGG CGGCTTATGC GGCGACGGCG ATCGCCGAAT ACTTTCGGGA CCGCGGCCGA
CGCGTGCTGT TGATGATGGA CTCGTTGACG CGCTTCGCGC GAGCCGGGCG CGAAATCGGC
CTCGCGGCCG GCGAGCCGCC TGCCAGGCGA GGCTTTCCTC CGTCGGTCTT CGCCGAATTG
CCGCGCTTGC TCGAACGCGC CGGAATGGGG AGGACCGGAT CGATCACCGC GCTCTATACC
GTACTCGCGG AAGACGAGAG CGGCAGTGAT CCTGTTGCGG AAGAAGTACG CGGCATTCTT
GACGGGCACA TGATCCTGTC GCGGGAAGTG GCGGCGAAAA ATCAGTATCC GGCGATCGAC
GTATTGGGGA GCCTGTCCCG CGTGATGCCG CTCGTTGTCG ACGATGGGCA TATGCGAGCG
GCGGCGCGGG TTCGGGAATT GTTGGCCAAA CATCGGGAGG TGGAGGTCTT GCTGCAGATC
GGGGAGTACA AGGCGGGGGC GAATCCGCTT GCGGACGAGG CGATCGCGAA GGCCGACGCG
ATTCGATCTT TTTTTTCGCA ACGAACGGAC GATTACGCGG CCGCCGAGGA CACCATCGCC
AGGCTGTATG CGTTGAGCGG GGCGAACTGA
|
|---|
| Protein sequence | MSADEPLRTA EFSHLADAIE REILAVSGVV RTGRVLEVIG TLIKVSGLDV ALGELCELRT
REGRLLQRAE VVGFTRDVAL LSPFSQLEQI SRTTQVIGLG RPLSIPVGDA LLGRVIDGLG
APLDGGPPLA SETLQPLIAA PPEPMSRRMI DAAMPTGVRV VDAMMALGEG QRMGIFAPAG
VGKSTLLGMF ARGAACDVNV IALIGERGRE VREFIELILG QAGMARSVVV CATSDRSSME
RAKAAYAATA IAEYFRDRGR RVLLMMDSLT RFARAGREIG LAAGEPPARR GFPPSVFAEL
PRLLERAGMG RTGSITALYT VLAEDESGSD PVAEEVRGIL DGHMILSREV AAKNQYPAID
VLGSLSRVMP LVVDDGHMRA AARVRELLAK HREVEVLLQI GEYKAGANPL ADEAIAKADA
IRSFFSQRTD DYAAAEDTIA RLYALSGAN
|
|---|
| |