| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1895 |
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| Symbol | |
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| ID | 4904535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 1860106 |
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| End bp | 1860924 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640145001 |
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| Product | type III secretion protein SpaR/YscT/HrcT |
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| Protein accession | YP_001075929 |
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| Protein GI | 126456304 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.515047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGCCTG CGCTTTTTGC TTTGCAGGGT TGGGCCGGCG CGCTGCTCGA TGATGTCACG
CTGCTCGCCA TCTGCTCGGT TCGCCTCTAT ATCGTGATGT CCGTTTTCCC GCCGACGGCT
GACGGGCTGT CGCAAGGCGT CGTGCGCAAT GCGCTCGTGA TCTTGTTCGG TTCGTACGTC
GCGTACGGAC AACCGGCGGG GTTCGTGCAG ACGCTGCACG GCACGCCGCT GATCGTGACC
GGCTTGCGAG AGGCCGTGAT CGGCGTCGTC CTCGGTATTG CCGCGTCCAC GGTGTTCTGG
GCGATCGAAG GCGCAGGTTG TTATATCGAC GATCTGACGG GATACAACAA CGTGCAGATG
ACGAATCCCG CGCGTGGGGA GCAGTCGACG CCGACGGCGA CGCTGCTCAC GCAGGTCGCG
ACGGTCGCGT TCTGGACGTT CGGGGGAATG ACCTTCCTGC TCGGTACGCT ATACGAATCG
TATCGATGGT GGCCGATCAC GCTGACCTTC CCCCGGATGC CGGCATTGAT CGAGGCGTTC
GCCGTGAGTC AGACCGACAG CTTGATGCAA ATGGTCACGA AGCTCGCCGC GCCGATGATG
CTGGTTCTTC TGCTGATCGA TTTCGCCTTC GGATTCGCCG CGAAGTCTGC TTCGAAGCTC
GATCTCATGG GGTTGAGTCA GCCTGTCAAG GGCGCGGTGA CGGTGCTGAT GCTCGCATTG
TTCGTCGGTA CGTTCGTCGA TCAAGCGCGC GAGCAGGTGA CGCTGTCGAC GCTATCGAAA
CAGCTGCGCG AGTGGTCGCA CGCCATGTCG CGCGGCTGA
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| Protein sequence | MTPALFALQG WAGALLDDVT LLAICSVRLY IVMSVFPPTA DGLSQGVVRN ALVILFGSYV
AYGQPAGFVQ TLHGTPLIVT GLREAVIGVV LGIAASTVFW AIEGAGCYID DLTGYNNVQM
TNPARGEQST PTATLLTQVA TVAFWTFGGM TFLLGTLYES YRWWPITLTF PRMPALIEAF
AVSQTDSLMQ MVTKLAAPMM LVLLLIDFAF GFAAKSASKL DLMGLSQPVK GAVTVLMLAL
FVGTFVDQAR EQVTLSTLSK QLREWSHAMS RG
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