Gene BURPS1106A_A1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1664 
SymbolnirD 
ID4903285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand- 
Start bp1634692 
End bp1635042 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content69% 
IMG OID640144770 
Productnitrite reductase [NAD(P)H], small subunit 
Protein accessionYP_001075698 
Protein GI126455543 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.963419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCC AACCTCAAGC ATCCGCGTGG ACGCCCGTCT GCGCGCTCGA CGAGATCGTG 
CCGAACACCG GCGTGTGCGC GCTCGTCAAC GGCGAGCAGA TCGCCGTGTT CCACGTCGAC 
GACGGCGGCG GCGGCCGCGC GTTCGCGATC GGCAACGTCG ATCCGCATTC GCAGGCCGCC 
GTGCTCTCGC GCGGGCTGAT CGGCAGCCTC GGCGAGCGGA TCGTCGTCGC ATCGCCGCTC 
TACAAGCATC ATTTCGACCT GCGCACGGGC GAGTGCGTCG AGGCGCCGGA GAAATCGGTG 
AGCGCGTATC CGTCGCGCGT CGAGGACGGC TACGTGTGGG TCGCGGCGTG A
 
Protein sequence
MNRQPQASAW TPVCALDEIV PNTGVCALVN GEQIAVFHVD DGGGGRAFAI GNVDPHSQAA 
VLSRGLIGSL GERIVVASPL YKHHFDLRTG ECVEAPEKSV SAYPSRVEDG YVWVAA