Gene BURPS1106A_A1588 details

Gene Information

• Locus tag: BURPS1106A_A1588
• ID: 4905741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: -
• Start bp: 1542356
• End bp: 1544173
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 640144694
• Product: AMP-binding domain-containing protein
• Protein accession: YP_001075622
• Protein GI: 126456159
• COG category: [I] Lipid transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGCGA TCGTTCCCGC CGCCGCGGCG GCAGCGACGA TGGTCGACAT CGTGCGCGCG 
CGCGCCGACC GGCAGCCCGA TCGGCCCGCG TACACGTATC TGCCGGAGCA GGAGGGCGCG 
CCGGCCGAGC TGCTCGACTA CGCGAGCCTC GTGCAGCGCG CGCACGCGAT CGCGGCCGCG 
CTCGACAGGC GCTTGGCCGG CGCGCCCGAC GCGCCGCGCA TGGCGATGCT GCTGTTTGCG 
CCGGGGCCGG ATTTTCTCGC GGCGTTCTGG GGCTGCCTGT CGGCGCGCGT GATCGCGATT 
CCGGCGCAGT TGCCGCGCCC CGGGCGCTGC GCCGCGACGC TCGAGGCGAT CGTGCGCAAC 
GCGGGCGTGC GGCTGGTACT CGCTAGCCGG CCGCAGGCCG ACGCGATCGG CCGGACGCTC 
GCGCGCTCCC CGGCGCTCGC GGGGCTCGAC ACGCTGTTCG TCGACGACGC GCTCGCCGAC 
GGCGCCGGGC GCCCCGCGCC GGCGCGGCCC GCGGCGGACG ACATCGCGTT CCTGCAATAC 
ACGTCGGGCT CGACGAGCCG GCCGAAGGGC GTCGTCGTCC GTCACCGGAA CCTTGTCGCC 
AACGAACGGA TGATCGCGCA GGCGATGTCG CTCGATCACG CGTCGACCTC CGTGGTGTGG 
ATGCCGCACT ACCACGACAT GGGCCTGATC GGCGGCATGC TGCAGCCGCT CTACAGCGGC 
GCGCACTGCG TCGCGATGGC GCCGACGACG TTCCTGAAGC GGCCGCTGCG CTGGCTGCGG 
GCGATCGCGC AATGGCGCGC GGTGTCGTCC GGCGGGCCGG ACTTCGCGTA CCGGCTGTGC 
GTCGAGCGGA TCGCGCCCGA GCAGGCGGCC GGGCTCGACC TGTCGAGCTG GCGCGTCGCG 
TTCAACGGCG CGGAGCCCGT GCGCGCGGCG ACGATCGCCG CGTTCGCCGA GCGCTTCGGG 
CCCGCCGGCT TTCGCGCGCA CGCGAGCTAT CCGTGCTACG GCATGGCGGA AGCGACGCTG 
CTCGCCGCGG GCGGGCGCGC CGGCGACGGC GCGCGCGTGC GGTGGATCTC GGCCGCGGCG 
CTGGCGGCCG GCCGCGCCGA GCCGCCGGCG CCGGGCGACG CGGGCACCGC CGCCGTGTGC 
TGCGGCGCGC CGCCCGCGGG CGCGCGACTC GCCGTCGTCG ATCCGGCGAC GCGGCAAAGG 
CGCGCCGACG GGCTCGTCGG CGAGCTCTGG ATCGCCGGCC CGCACGTCGC CGACGGCTAT 
CATCGCGCGC CCGAGGCGAG CGCCGCGGCG TTCGGCGCCG CGATCGCCGG CCCCGAGCCG 
GACGCGGGCC CGTGGCTGCG CACGGGCGAT CTCGGCTTCG TGCTCGACGG CGGCGTGTAC 
GTCACCGGCC GGCTGAAGGA GATGATGATC GTCAACGGGC GCAATCTGTA TCCGCACGAT 
GTCGAGGACA CGCTGCGCGA GGGGCTCGCC GAGATCCGCG ACGCCGCGGT GTTCGCGCTG 
ATCGAACCGG GCGGTCGCGA GCGCACGGTC GCGATCCTCG AGCTGGCCGC CGCGCAGCGG 
CGGCTGATCC TGCAACCGGA CGCGCATGCC GACGCGGGGC TCCAGGCGAT CGCCATGGAC 
GCACGCGCGC TCGCCGCGCG CGCGTGCGAG CTGCCGCTCG ACCACGTGCG GCTGAGCCTG 
CCGGGGGCGA TCGTCAAGAC GACGAGCGGC AAGACGCGCT ATGGCGAGCT GCGCGCGCGC 
ATGCTCGCGC TGCCGGAATC GCTGCGGCAG GCGCCGGTAT CGATCGAGGC GGGCCGCGCC 
CGCCGGGAGG AAGCATGA 

 

Protein sequence

MTAIVPAAAA AATMVDIVRA RADRQPDRPA YTYLPEQEGA PAELLDYASL VQRAHAIAAA 
LDRRLAGAPD APRMAMLLFA PGPDFLAAFW GCLSARVIAI PAQLPRPGRC AATLEAIVRN 
AGVRLVLASR PQADAIGRTL ARSPALAGLD TLFVDDALAD GAGRPAPARP AADDIAFLQY 
TSGSTSRPKG VVVRHRNLVA NERMIAQAMS LDHASTSVVW MPHYHDMGLI GGMLQPLYSG 
AHCVAMAPTT FLKRPLRWLR AIAQWRAVSS GGPDFAYRLC VERIAPEQAA GLDLSSWRVA 
FNGAEPVRAA TIAAFAERFG PAGFRAHASY PCYGMAEATL LAAGGRAGDG ARVRWISAAA 
LAAGRAEPPA PGDAGTAAVC CGAPPAGARL AVVDPATRQR RADGLVGELW IAGPHVADGY 
HRAPEASAAA FGAAIAGPEP DAGPWLRTGD LGFVLDGGVY VTGRLKEMMI VNGRNLYPHD 
VEDTLREGLA EIRDAAVFAL IEPGGRERTV AILELAAAQR RLILQPDAHA DAGLQAIAMD 
ARALAARACE LPLDHVRLSL PGAIVKTTSG KTRYGELRAR MLALPESLRQ APVSIEAGRA 
RREEA