Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1035 |
Symbol | |
ID | 4905389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 1001962 |
End bp | 1003299 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640144141 |
Product | major facilitator family transporter |
Protein accession | YP_001075071 |
Protein GI | 126456375 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.268717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACGC CTCATGCCGA AGCCTTCTGC GCGCCCGCCG GCAGCGCGCG CGCATCGCTG AACCGCCTGC TGTTTCGCAA GCTGCTGCCG ATTCTGATCA CCGCGTACGT GATCAGCTTT CTCGACCGCA CGAACATCGC GTTCGCGAAG CATTCGATGG GCATCGATCT CGGCCTCTCG TCGGCCGCCT ACGGCCTCGG CGCGGGGCTC TTCTTCGTCA CGTACGCATT GTTCGAGATC CCGAGCAATC TGATCATGCA TCGCGTCGGC GCACGCTTCT GGATCGCGCG GATCATGATC ACTTGGGGCG CGCTGTCCGT CGCGATGGCG CTCGTGCGCG GCGAGACGTC GTTCTACGCG ATGCGGCTGC TGCTCGGCGC CGCCGAAGCG GGGCTCTTTC CCGGCGTGAT GCTGTATCTG ACGTACTGGT TCGGCCGCGA GGAACGTGCG CGCGCGACCG GCTATTTCCT GCTCGGCGTA TGCGTGGCGA ACATCGTCGG CGGCCCGCTC GCGGGCGCGC TGCTCGCACT CGACGGCGCG CTCGGGCTGC ACGGCTGGCA GTGGCTCTTC ATCGTCGAAG GCGTGCCGGC GATCGCGCTC GCCTTCGTCG TCTGGGCCCG CCTGCCGGAG CGGCCGAGCG ACGCCCGCTG GCTCGCGCCC GAGCTCGGCC GCGCACTCGA GCGCGCGCTC GCGAGCGAGC AGGCACAGAG CGCGGCGGCG CACGGCGCGC AGGCGTTCGG CGTCGCGCTG CGCGATCCGC AGATCTGGCT CGCGATCTTC GTGTACTTCT GCCATCAACT GACGATCTAC ACGATGATCT TCTTCCTGCC CGGCATCATC GGCGAATCGG GGCGCTTCAG CCCGATCGTC GTCGGCCTGC TCGCCGCGAT GCCGTGGCTT GCCGCGGCGC TCGGCGCGGC GACATTGCCG CGCTTCGCGC GCGATTCGTC GCGATCGCGG CGGATTCTGT GCGCGGGGCT CGGGGTGATG GCCGCGGGGC TCGTCTGCGC GGCATATGCG CCGCCCGCGG CCGCGCTCGC GAGCGTGTGC GTCGCCGCGT CGATGTTCTT CGTCGTGCAA TCGATCGTCT TCACGTTCCC GGCCTCGCGC CTCGCGGGCA GCGCGCTCGC GGGCGGGCTC GGCCTCGTCA ATACGTGCGG CCTGCTCGGC GGCTTCGTCG GGCCGACCGT CGTCGGCACG ATCGAGCAGA CGACCGGCCA CGCGAAGAAC GGTCTCGCGT TGCTCGCGAT CGCGCTCGGC GTCGCCGCGC TCGCGAGCCT GCGGCTGCGG CACGGGCACG AACGCGCGCA CCCGGCGCGG CCGAGCCGCG CGCGGTGA
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Protein sequence | MSTPHAEAFC APAGSARASL NRLLFRKLLP ILITAYVISF LDRTNIAFAK HSMGIDLGLS SAAYGLGAGL FFVTYALFEI PSNLIMHRVG ARFWIARIMI TWGALSVAMA LVRGETSFYA MRLLLGAAEA GLFPGVMLYL TYWFGREERA RATGYFLLGV CVANIVGGPL AGALLALDGA LGLHGWQWLF IVEGVPAIAL AFVVWARLPE RPSDARWLAP ELGRALERAL ASEQAQSAAA HGAQAFGVAL RDPQIWLAIF VYFCHQLTIY TMIFFLPGII GESGRFSPIV VGLLAAMPWL AAALGAATLP RFARDSSRSR RILCAGLGVM AAGLVCAAYA PPAAALASVC VAASMFFVVQ SIVFTFPASR LAGSALAGGL GLVNTCGLLG GFVGPTVVGT IEQTTGHAKN GLALLAIALG VAALASLRLR HGHERAHPAR PSRAR
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