Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0824 |
Symbol | |
ID | 4905611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 820004 |
End bp | 821509 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640143930 |
Product | NfeD family protein |
Protein accession | YP_001074860 |
Protein GI | 126456811 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.826176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGTT CCTCGCCGCG GCCGCCGCCC GCGCGCGGCA AACTCCCCGC GCGGCTCGCG CGCGCGGCCG TGCTGATCGG CCTGCTGCTC GCATGCGCGG CGGTGGCCGG CGCCGCCGCC GCCGCGCGCG CGCCCGTCGT CGTGATCCCG GTCGCGGGCG CGATCGGCCC GGCGAGCGCC GATTTCGTCG TCCGCGGCCT CGAGCGCGCC GCGCGCGAGC ACGCGCCGCT CGCGATCGTC CAGCTCGACA CGCCCGGCGG CCTCGACACC TCGATGCGGC AGATCATCAA GGCGATCGTC GCCTCGGGCG TGCCCGTCGC CGCGTTCGTC GCGCCGGGCG GCGCACGCGC GGCGAGCGCC GGCACCTATA TCGTCTATGC AAGCCACGTG GCGGCGATGG CGCCCGGCAC GAACCTCGGC GCGGCGTCGC CCGTGCAGCT CGGCATCGGC GGCCAGGCGC CGGCGGGCGG GCGACGCGAG CCTGCCGGCG CGCCCGGGGC GGCGGGCGCG GGTGCGACCG ATACGGAATC GATCGAAACC CGCAAGGCGC TGCACGACGC GGCCGCTTAC ATCCGCGGCC TCGCGCAGTT GCGCGGGCGC AACGCCGAAT GGGCGGAGCG CGCGGTGCGC GAGGCGGTGA GCCTGCCCGC GAACGACGCG CTCGCACAGC ACGTGGTCGA CCTGCTCGCG AACGACCCGG CCGATCTCGC CGCGAAGCTC GACGGCCGCA CGATCGTCAC CGCCACGGGC GCGCACCGGC TCGACACCGC GCAGGCGCCG CTCGAGACGC TCGAGCCCGA CTGGCGCAGC CGGCTGCTCG CGACGATCGC CGATCCGAGC GTCGCGCTCG TGCTCGTCAC GCTCGGCATG TACGGGCTCT TCTTCGAATT CGCGAATCCC GGCTTCGTGC TGCCGGGCGT CGCGGGCGCG ATCAGCCTGC TCGTCGGCCT GTTCGCGCTG CAATTGCTGC CGATCAGCTA CGCGGGCCTC GCGCTCGTGC TGCTCGGCAT CGCGTTCCTG ATCGCCGAGA CGTTCCTGCC GACGTTCGGC GCGCTCGGCG TGGGCGGCAT CGTCGCGTTC GCGATCGGCG CGCTGATGCT GATCGACACC GACGTGCCCG GCTACGGCGT GCCGTGGCCC GTGATCGCGT CGCTCGCGGC CGCGGGCGCG ATCCTCGTGT TCGGCGTGTC GGGCTTCGCG CTGCGCGCGC GCCGGCGGCC CGTCGTCACG GGCGCGGAGG CGATCGTCGG CAGCATCGGC GAGGTGCTCG ACGACGGGCT CGTGCCCGAT CAGCCGCCGC AGATCGGCCC GAGCGCGGAC CCGGGCGCGC CGCTCGCGCC GTCCGCGGCC GGCTGGGCGC GCGTGCACGG CGAGCGCTGG CGCGTCGCGA GCGCGACGCC GATCGCGGCC GGCCGCCGCG TGCGCGTGAC GGGCCGCAAC GGCCTCACGC TCACCGTCGC ACCGCTGTAC GACAACGTCG TTCCCCCACG AGGAGAGCCA CCATGA
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Protein sequence | MPRSSPRPPP ARGKLPARLA RAAVLIGLLL ACAAVAGAAA AARAPVVVIP VAGAIGPASA DFVVRGLERA AREHAPLAIV QLDTPGGLDT SMRQIIKAIV ASGVPVAAFV APGGARAASA GTYIVYASHV AAMAPGTNLG AASPVQLGIG GQAPAGGRRE PAGAPGAAGA GATDTESIET RKALHDAAAY IRGLAQLRGR NAEWAERAVR EAVSLPANDA LAQHVVDLLA NDPADLAAKL DGRTIVTATG AHRLDTAQAP LETLEPDWRS RLLATIADPS VALVLVTLGM YGLFFEFANP GFVLPGVAGA ISLLVGLFAL QLLPISYAGL ALVLLGIAFL IAETFLPTFG ALGVGGIVAF AIGALMLIDT DVPGYGVPWP VIASLAAAGA ILVFGVSGFA LRARRRPVVT GAEAIVGSIG EVLDDGLVPD QPPQIGPSAD PGAPLAPSAA GWARVHGERW RVASATPIAA GRRVRVTGRN GLTLTVAPLY DNVVPPRGEP P
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