| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0570 |
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| Symbol | rfbH |
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| ID | 4905953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 562571 |
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| End bp | 563923 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640143676 |
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| Product | lipopolysaccharide biosynthesis protein rfbH |
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| Protein accession | YP_001074606 |
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| Protein GI | 126455766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.718182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATCA TCCGCCCCAC GTTCGCGCCG GACGCCGCGC GAAGCCCGGA CGCCATCCGC
GCGGAAATCG CCGCGCTGGT TCGAGAGTAT GCGAACGCGA CGCAGGCGCG TGCTCCGTTC
GTGCCGGGCC GCACGCCCGT GCCCGTGTCC GGCAAGGTGA TCGGCGCGCC GGAACTGCAG
CACATGGTGG ATGCGAGCCT CGACGGCTGG CTGACGACGG GGCGCTTCAA CACGGCCTTC
GAGAACAGGC TCGCGCGCTA TCTGGGCGTG ACGCACGTGA TCACGGTGAA CTCCGGTTCG
TCGGCGAATC TCGTCGCGTT CTCGACGCTG ACCTCCGATC GTCTCGGCGA GCGGGCGATC
CGCCCCGGCG ACGAAGTGAT CGGCGTGGCC GCGGGATTCC CGACGACGGT CAATCCGATC
CTGCAATTCG GCGCGGTGCC CGTGTTCGTC GACATCGAAC TCGGCACGTA CAACGTCGAC
GCGACGAAGC TCGAAGCGGC GATCTCGCCG CGGACCCGGG CGATCATGCT CGCGCACTGC
CTCGGCAACC CGTTCAACGT CGAGGCCGTG ACCTCGCTGT GCCGCAAGTA CGGGCTCTGG
CTGATCGAGG ACTGCTGCGA CGCGCTGGGA GCGCGGTACG ACGGGCGGCT CGTCGGCACG
TTCGGCGACA TCGCGACGCT GAGTTTCTAC CCGGCGCACC ACATCACGAT GGGCGAGGGC
GGCGCGGTGT TCACCAATAA CGACGAGCTC GCGCGCATCG CCGAATCGTT CCGCGACTGG
GGCCGGGATT GCTACTGCGC GCCGGGTGCC GACAACACCT GCGGCAAGCG CTTCTGCTGG
CAGCTCGGCG AGCTGCCGCG CGGCTACGAC CACAAGTACA CGTACAGCCA CTGCGGCTAC
AACCTGAAGA TCACCGACAT GCAGGCCGCT TGCGCGCTCG CGCAGATGGA TCGCGTCGAC
GGCTTCATCG AGCGGCGCCG CGGCAACTTC GCCTACCTGA AGGAGCGGCT GTCGTCATGC
GATGCGTTCC TGCATCTGCC GCAGGCGACA TTCAATTCGA ATCCTTCGTG GTTCGGCTTC
CCGCTGACGC TGAGGGAGGA CACGGGCGTC GCGCGGGTCG ATTTGCTCGA TTACCTGAGC
CAGGGCGGCG TCGGCACGCG CCTGCTGTTC GCGGGCAACC TGACGCGCCA GCCGTACATG
CGGCATCGGC GGTATCGCGT GAGCGGCGAG CTGGCGGTCA CGGACGCCGT GATGGAGCGC
ACGTTCTGGA TCGGCGTCTT TCCGGGGCTG GACGAAGCGA TGCTCGATTA CGCGTGCACG
AAGATCGAGA CGTTCCTGGG CATCAACTTT TGA
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| Protein sequence | MDIIRPTFAP DAARSPDAIR AEIAALVREY ANATQARAPF VPGRTPVPVS GKVIGAPELQ
HMVDASLDGW LTTGRFNTAF ENRLARYLGV THVITVNSGS SANLVAFSTL TSDRLGERAI
RPGDEVIGVA AGFPTTVNPI LQFGAVPVFV DIELGTYNVD ATKLEAAISP RTRAIMLAHC
LGNPFNVEAV TSLCRKYGLW LIEDCCDALG ARYDGRLVGT FGDIATLSFY PAHHITMGEG
GAVFTNNDEL ARIAESFRDW GRDCYCAPGA DNTCGKRFCW QLGELPRGYD HKYTYSHCGY
NLKITDMQAA CALAQMDRVD GFIERRRGNF AYLKERLSSC DAFLHLPQAT FNSNPSWFGF
PLTLREDTGV ARVDLLDYLS QGGVGTRLLF AGNLTRQPYM RHRRYRVSGE LAVTDAVMER
TFWIGVFPGL DEAMLDYACT KIETFLGINF
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