| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0380 |
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| Symbol | |
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| ID | 4905695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 361247 |
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| End bp | 362584 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640143487 |
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| Product | major facilitator family transporter |
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| Protein accession | YP_001074423 |
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| Protein GI | 126456779 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.420332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGAAG ACAACCTGAC GATGCCCGCC GACGGCGCGG GCGTCGCCCC GGCCGACGCC
GTATCGGCGG CGGGCTTGCG CACCGCGCGC GGCGGTGCGA TCGCGGCCGC GGTGATCGGC
AACTGGCTCG AATTCTTCGA TTTCACCGTC TACGGTTTTT TCGCGGTGAT CATCGGCAAG
CTGTATTTCC CGTCGCACGA CGCGACGACG TCGCTGCTGC TGTCGGTCGC GACGTTCGCC
GCGGGCTTCT TCACGCGTCC GCTCGGCAGC ATCGTGCTCG GCGTCTACGC GGACCGCCGC
GGCCGCAAGG CGGCGCTGAA CCTGACGATC CTGCTGATGG CGCTCGGCAC CGGCATGATC
GCGCTCGCGC CGACCTACGC GCAGATCGGC GTGCTCGCGC CGGTGATCGT CGTGTGCGCG
CGGCTGATGC AGGGCTTTTC GCAAGGCGGC GAGTTCGGCG CGGCGACGTC GACGCTCGTC
GAGCACGGCG GCGCCGCGCG CCGGGGCTTT CGCGCGAGCT GGCAGCTCGC GACGCAGGGC
GGCGCGGCGC TGATGGGCTC GGGGTTCGCG GCGCTGCTGT CGAACACGCT CGCGAAGGGC
GCGCTGGAAA GCTGGGGCTG GCGCGTGCCG TTCGCGCTCG GTGTGCTGAT CGCGCCCGTC
GGCATGTATC TGCGCCGCCG CCTGGCTGAC GATGCGCCGG GCGCCGGCCA CCACGGCATC
GACGGCGGCG TGCTGCGCGA GCTGTTCGCG CGGCACGGCC GCACGGTGCT GCTGCTGACG
CTCACGGTGA TGGGCGGCAC CGTATCGACG TACATCCTGA CGTTCTACAT GCCGACCTAC
GCGATCCATA CGCTCGGGCT GCCGATGAAG CTGTCGATGT TCGTCGGCGT CGCGTCCGGC
TGCGTGATGC TCGTCACCTG CCCGTTGTTC GGCTGGCTGT CCGACCGGAT CGGCAGCCGG
CGCCTGCCGA TCTTCGTCGG GCGCGGCGTG CTCGTCGTGC TGCTGTTTCC GGCGTTCGTG
CTGATGAACC GCTATCCGTC GCTCGCGGTC GTGATGCCGC TCACCGGGCT GATGCTGCTG
TTCTATTCGA TGGGCTCGGC GTCCGAGTTC GCGCTGATGT GCGAATCGTT TCCGCGCCGC
GTGCGCGCGA CGGGCATCTC GATCGCCTAT GCGCTCGCGG TGACGCTGTT CGGCGGCACC
GCACAGCTCG TCGCGACGTG GCTCGTGCGC GTGACGGGCA GCACGCTCGC GCCGGCCGCT
TACGTGGCCG TGTGCGTGAT CGTGTCGCTC GTCGCGGTCG GGATGCTGCG CGAGACGGCG
ACGGAAACGG CCGACTGA
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| Protein sequence | MHEDNLTMPA DGAGVAPADA VSAAGLRTAR GGAIAAAVIG NWLEFFDFTV YGFFAVIIGK
LYFPSHDATT SLLLSVATFA AGFFTRPLGS IVLGVYADRR GRKAALNLTI LLMALGTGMI
ALAPTYAQIG VLAPVIVVCA RLMQGFSQGG EFGAATSTLV EHGGAARRGF RASWQLATQG
GAALMGSGFA ALLSNTLAKG ALESWGWRVP FALGVLIAPV GMYLRRRLAD DAPGAGHHGI
DGGVLRELFA RHGRTVLLLT LTVMGGTVST YILTFYMPTY AIHTLGLPMK LSMFVGVASG
CVMLVTCPLF GWLSDRIGSR RLPIFVGRGV LVVLLFPAFV LMNRYPSLAV VMPLTGLMLL
FYSMGSASEF ALMCESFPRR VRATGISIAY ALAVTLFGGT AQLVATWLVR VTGSTLAPAA
YVAVCVIVSL VAVGMLRETA TETAD
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