Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0229 |
Symbol | pvcB |
ID | 4904041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 212421 |
End bp | 213335 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640143336 |
Product | pyoverdine biosynthesis protein PvcB |
Protein accession | YP_001074272 |
Protein GI | 126455993 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGATC TCTTCCTGCA GCGGGCGGTG TCGCTCGAAC CGTTGACGAG CGACGCCGGC GCGCCCTGTT CGTTCGGCGT GCTCGTGAAG CCGCGCCGCG CGCGCACGCA CGTCGGTGAG CTGTCGATCG AGTGGCTGCG CGCGCTCGTG CGCAGCCAGC AGCTCGTCGT GCTGCGCGGC TTCGACAGCT TCGCCGATGC GCCGGGCATG ACGCGCTATT GCGCGGCGTT TGGTGAAATC ATGATGTGGC CGTTCGGCGC GGTGCTCGAG CTGCGCGAGC AGGCGAATCC GGTCGATCAC GTGTTCGCGA GCAGCTACGT GCCGCTGCAC TGGGACGGCA TGTATCTGGA GACCGTGCCG GAATTCCAGG TGTTCCAGTG CGTGCAGGCG ATCGGCGATG CGCACGGCGG GCGCACGACG TTCTCGAGCA CCACCGAGGC GCTGCGCGTG GCGACGCCCG AGGCGCGCGC GCTCTGGCAG CGCGCGCACG GCCGCTATCG GCGCACGGTC GAGCTCTACA GCAACACGGT CGAAGCGCCG ATCGTCGAGC GGCACCCGCG CCGCGAATTT CCGATCCTGC GCTTCTGCGA GCCGCCGATC GCGGACGATC CGACGTTCAT CAATCCGTCG AGCTACGCAT TCGGCGGCAT CGCCGACAGC GAGCGGGACG CGCTGCTCGG CAGCCTGACG CGCGCACTCT ACGATCCGCG CGCGCACTAC GCGCACCGCT GGCGCACGGG CGACGTCGTG CTCACCGACA ACTTCACGCT GCTGCACGGC CGAGAGCGCT TCACGAGCCG AAGCGGCCGC CATCTGCGCC GCGTGCACAT CCATGGCGAT CCGCCGCTGC GCAATCCGCA CCTGTCGAAG CACCCGCACG ACGCGGCGGC CGCCGACGCG GCCGCTTCGG CCTGA
|
Protein sequence | MNDLFLQRAV SLEPLTSDAG APCSFGVLVK PRRARTHVGE LSIEWLRALV RSQQLVVLRG FDSFADAPGM TRYCAAFGEI MMWPFGAVLE LREQANPVDH VFASSYVPLH WDGMYLETVP EFQVFQCVQA IGDAHGGRTT FSSTTEALRV ATPEARALWQ RAHGRYRRTV ELYSNTVEAP IVERHPRREF PILRFCEPPI ADDPTFINPS SYAFGGIADS ERDALLGSLT RALYDPRAHY AHRWRTGDVV LTDNFTLLHG RERFTSRSGR HLRRVHIHGD PPLRNPHLSK HPHDAAAADA AASA
|
| |