| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0185 |
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| Symbol | |
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| ID | 4904623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 175169 |
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| End bp | 176557 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640143292 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001074228 |
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| Protein GI | 126457325 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGTT TCCTCATTCA ACGCCCGTCT CGCCTGCAGA CGCTTGGGGC CGGAACATTC
GCGTTGCTGA CGCTGGGCGC GCTCGTGGCC ACCGCGCCGC ACGCGGATCT GCGGCTGCCG
CCGATCGAGC CGTTCCTGCC GATGTGCGCG CTGACCGTGT TCAGCACGTC GCTCATCGCG
GCCTTCCTGC TCGGCGCGCA GTTCATCGTG ATGCGCCGCC CGATTCTCGG CACGCTGGCC
GGCGCGTATG CCTTCGCGGC GATCACGGTC GCGCTTCAAC TGCTCGCGTT TCCCGGCGTC
TTCGCGCCCA CCGGCCTGCT CGGCGCGCGG CATGAGAGCG CCGCGTGGCT ATGGACCTTC
TGGCACGGCG GCTTCCCGCT GTTCGTCGTG CTGGCGATGC TGACGCGATA CCGGCTCGCG
AAGCGGCTCA GCAACACCCG CCACGTCGGC CGCTGGCTCG CGACATTGGC CGGCGTGCCG
ATCGCGGTCG CGATCGCGCT CGGCCTCGTC GCGCTGCGCG CGGATCTGCC CGCGCCGTTC
GGCCCGTCGC TCGACAATGC GCTGCTCGCC GCCGATCCGG TGGCGATCGT CGTCTGGACG
ATCAACCTCG GCGCGATCGC CGCCGCGCTG TTCGTCGGCC GGATGAGGAC GATGCTCGAC
ATCTGGCTCG TCGTCGTGCT GCTCGCCGGC TTCACCGATA CCAGCCTGAA TCTGCTGAGC
ACCGCGCGCT TCACCGCCGG CTGGTACGTC GCGCGCCTGT TCAGCATGAT CGCGCCGGGC
ATCCTCGTCT GCGTGCTCGT CTGGGAAGTG ACGGTGCTGT ACCGGCGGCT GTTCGACGCG
CACGCATCGC TCATGCGGAC CGCTTCGCAC GACGCGCTGA CGATGGTGTA CAACCGCAGC
TATTTCAACG AACAGTTCGA GCGCGCCTTT CACTACGCAC GCCGGCACAA CACGCTCCTC
GCGCTCGTGA TGGTCGACGT CGATCATTTC AAGCAGTACA ACGATACGTT CGGCCACCTG
CAAGGGGACA CGTGCCTCGC CGCCGTCGCG GCCGCGCTGT CCGGCGTCGC GGGCCGTGCG
AACGATTTCG TCGCGCGCTA CGGCGGCGAG GAATTCGCCG TCGTGCTGCC CGGGGCGGAC
GAACGCGGCG CGGCGACGAT CGCCGAACGG GCACGGCAGG CCGTCGAGCG GCTGCGCATC
GCCGCCGACA CGGCGCCCGG CTATGTGACG GTGAGCGCCG GCTACGCGGC GAGCAGCGGC
AATCCGTTCG AAACGCCCGG CGCGCTGATC GCGGCCGCCG ACGCGGCGCT CTACCGTGCG
AAGATGCTGG GGCGCAACGT CAGCGCCGCG CCCCACCACG ACATGCAGGA TACGGCGATG
CGCGACTGA
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| Protein sequence | MDGFLIQRPS RLQTLGAGTF ALLTLGALVA TAPHADLRLP PIEPFLPMCA LTVFSTSLIA
AFLLGAQFIV MRRPILGTLA GAYAFAAITV ALQLLAFPGV FAPTGLLGAR HESAAWLWTF
WHGGFPLFVV LAMLTRYRLA KRLSNTRHVG RWLATLAGVP IAVAIALGLV ALRADLPAPF
GPSLDNALLA ADPVAIVVWT INLGAIAAAL FVGRMRTMLD IWLVVVLLAG FTDTSLNLLS
TARFTAGWYV ARLFSMIAPG ILVCVLVWEV TVLYRRLFDA HASLMRTASH DALTMVYNRS
YFNEQFERAF HYARRHNTLL ALVMVDVDHF KQYNDTFGHL QGDTCLAAVA AALSGVAGRA
NDFVARYGGE EFAVVLPGAD ERGAATIAER ARQAVERLRI AADTAPGYVT VSAGYAASSG
NPFETPGALI AAADAALYRA KMLGRNVSAA PHHDMQDTAM RD
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