| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0163 |
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| Symbol | |
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| ID | 4905557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 153172 |
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| End bp | 155541 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640143270 |
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| Product | fimbrial usher family protein |
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| Protein accession | YP_001074206 |
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| Protein GI | 126455641 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCCTGT CGTTTAGCTT GCTCCTCGGC ATCGCATGGG GAAGCAACGA CGCATTCGCC
GTCTCGTCGC CTTCGCCCAG CGCGGCGGTT GAATTCGACA CCCAAACGCT GATTGCGCGA
GGCTATTCCG CCGACATTGC AAAATTCTTC AGCGGCGATT CGCGCTTTCT CCCCGGCAAG
CAGGAGGTCA CGATCGCACT CAACGCCAAC CAGACCTACA CGACGAACGT TCAATTTGAT
GACGACGGCG ATCCGTGCTT CGACGCCGCG CTGTTGGACA CGCTGCGACT GCGCAAACCA
TCCGATCTGG CCGGCTGCGC CGATCCCGAA CAAATGTGGC CGGAATTTCA CATGAAACTC
CACCCTGGGC AGTTTCGAAT CGACATGACC GTGCCGGAGG AAGCATTCGA CCCACGGCGA
CGCGGCAACG GACTGCACTC CGGCGGCGAG GCGGTGTTAC TGAATTACGA TGTCTTCGCG
CAGCGCTTCG ATACCCGGTT CGGCAGCAGC CATTACTTAC AGGCACGGCT CGAGCCCGGC
TTCAATATCG GAAACTGGTT TTTCCGTAAC CGTGGAGCGC TGACCCATTC AGGCAAGGGA
TTCTCGTATC AGTTGCAAGA CACCTACCTC GCGCGTACCG TCGACGCGTG GGGGGCCATC
ACGCAGATCG GCCAGTTCAC GTCCACAGGC GAAAATCTGG GCGGCCTGCC GATGCTCGGC
TTCCAGATCA GTTCGGACCG CTTGCAAAAT AGCGGGCAAC TGACCGTTCC CATCCAAGGC
ATCGCGGAAA GCAACGCGAC GGTCGAAGTG CGTCAGCGCG GCCGTGTCGT CTATCGCACG
ATCGTCCCGC CCGGGCCTTT CATGCTGTCC GACATCGGCA GCGTCGCGCA GAACGCCGAC
CTCCAAATCG AAATCACCGA ACAGGACGGA CGAAAGCGAC GCTTCGAGAT GCCCGTCGGC
ATGGGCTATG CCGACGCGAA GCAGCCGACG ACTTGGCAGG CCGCCATCGG CCGCTATCAG
GATGCAGGCA ATTCCGATCG AACGCGTGCA CCCGCGATAT TCGCCACCGG TGAAATCTCT
TTCTCACCGC TCGACAATCT ACGCGTGTCG ACCGCCGCGC TCGCGGCCTC CGGCTATCTT
CATGCGAGCG TCCAAGGAAC GCTTTCGGCG AAATCCGGAG CATGGCTTGC AAGCGGAGTG
CGCTATTCGC GGATGGCTGG CGCGGGCCAA GGATATCAGT TCGAGTTACA AGGCTCGTCC
CGAATCGGAG GAAACGTGTT CGCATCCGCC TCATGGCTGT CGCGCTCGAT TCGCTATACC
ACGCCAGATG TCGCGCTCGG ATCGCTTGGC GATGCAACCG GAACCGGTCA AACCAAGCAT
TCGGCGAACG CGTCGATCAA CTGGGCCCAT CCGCGTTGGG GTAGCTTTAC GTATGGCCTG
TCGTACAACA GTTTCGTCGG CGCACCGAAC TCCGTATCTC ACACGCTGAG CATCGGTCGC
AAGATCGGTC GGGCAAACGT CAGCCTTGCC GCACAAATCA GCCCCAAGAG CGGCAGCAGC
GTCTACGCCA ACGTGTCGAT TCCGCTAGGC GGTGGTTCGT TGAGTGCGCG AACCACGCGC
TCGCAGCGGG GGGATCTCAC GTTCGGCACG TCCTACGGCA ATCGATTGGG ACGAGACGGA
TCGTATTCCA TCGGCGCATC GGGCAGCAAG AGCGGCCAGA CCGCGAACGC GTCCGTCAGC
ATGAGGACGG GCTTCGCTCA ATTTGGCGCC GGCGTGGCTC AGAGTACGTC CAACTCACGG
TCTACCTACC TGTCTGCAAG CGGAGGCATC GCCTACGCCA ATGGACTATT CGGCACGGCA
TCCAGCCGGA TCGGGGAAAC GTTCGCCATC GTGTCGGTCC CGAACCAAAA GGGTTTGCGC
ATCAGCGCAC CTGGTGGAAC GTCCATCACC AACCCATTCG GCACCGCAGT CATCTCTTCC
CTGACGCCCT ACACGAAAGC GCAACTCAGA CTCGATACGC AAAGCCTTCC CATGAATGTG
CGTCTCGACA CGACCACCGT CGACATCGGG CTCCGACGGG GCAGCGTGCT GACGCGCACG
ATCCATGCAG CCGAAACGCG ACAGCTCATG TTGACGATAC GAGATTCGAC CGGTGCCACC
GCACCGGTCG GCACCACCGT GCTTGATGAG CAAGGCCAGT TCCTCGGCAC GATCATCGGA
GATGGGAACT TCATCCTGAA TGACGACGAC ATCGGTAGGC CGATCAGGTT GTCAGGCGTC
AATCGTAGCG AGTGCCGCGT GACCTACGAG GCACCCGCAC GGTTCGATCC AAATCAGCCT
TATGAAGAGG CAGAAGGAAC ATGCGGGTGA
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| Protein sequence | MVLSFSLLLG IAWGSNDAFA VSSPSPSAAV EFDTQTLIAR GYSADIAKFF SGDSRFLPGK
QEVTIALNAN QTYTTNVQFD DDGDPCFDAA LLDTLRLRKP SDLAGCADPE QMWPEFHMKL
HPGQFRIDMT VPEEAFDPRR RGNGLHSGGE AVLLNYDVFA QRFDTRFGSS HYLQARLEPG
FNIGNWFFRN RGALTHSGKG FSYQLQDTYL ARTVDAWGAI TQIGQFTSTG ENLGGLPMLG
FQISSDRLQN SGQLTVPIQG IAESNATVEV RQRGRVVYRT IVPPGPFMLS DIGSVAQNAD
LQIEITEQDG RKRRFEMPVG MGYADAKQPT TWQAAIGRYQ DAGNSDRTRA PAIFATGEIS
FSPLDNLRVS TAALAASGYL HASVQGTLSA KSGAWLASGV RYSRMAGAGQ GYQFELQGSS
RIGGNVFASA SWLSRSIRYT TPDVALGSLG DATGTGQTKH SANASINWAH PRWGSFTYGL
SYNSFVGAPN SVSHTLSIGR KIGRANVSLA AQISPKSGSS VYANVSIPLG GGSLSARTTR
SQRGDLTFGT SYGNRLGRDG SYSIGASGSK SGQTANASVS MRTGFAQFGA GVAQSTSNSR
STYLSASGGI AYANGLFGTA SSRIGETFAI VSVPNQKGLR ISAPGGTSIT NPFGTAVISS
LTPYTKAQLR LDTQSLPMNV RLDTTTVDIG LRRGSVLTRT IHAAETRQLM LTIRDSTGAT
APVGTTVLDE QGQFLGTIIG DGNFILNDDD IGRPIRLSGV NRSECRVTYE APARFDPNQP
YEEAEGTCG
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