| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0123 |
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| Symbol | pqaA |
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| ID | 4905281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 107264 |
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| End bp | 108715 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640143230 |
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| Product | PqaA protein |
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| Protein accession | YP_001074166 |
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| Protein GI | 126458397 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4287] PhoPQ-activated pathogenicity-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.434037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTCGC TCGCCTACCC GCGCGCCGAA GCCGCGCCGA TCGCTTTTCC GTGCCCAATC
GACGCGCGCC GCGATTTGAC CGATACGCTC GCCTGCTACC GGCAGACGGT GGAAAACCAG
CCTTTGAACT ACACGATGAC AAGCATCGTG CAACTGCCCG GGATCGAACA GCGAACGTAC
CGGCTTGTTT CGCAATCGTG GTCGCCCGAT CAGCTCGTGC GCCCTGACAC GTGGGTACAC
GAAGTCGCGC TTTACATTCC GCAAGACGCG CTGCCTCGTC GCGCACTCGT GATCGCCAAT
GATGGTACGC GGCACCCAGG CGAAGGGGAA ACGCCGAGGA CACCAAACGA TTTCCTGCCC
GATACGCTGG CGGATATCGC CAGAAGCACG CGCACCGCGG TCATTTCGGT GAGCGATGTG
CCTAACCAGC TTTTGTCTTA TGCGGACGAC GGCAAGCCGA AAGCGGAGGA CGACAGTGTG
GCGCGCAGTT GGACGCTTTT CATGCAGTCG CCGCATACGC GCGGCGCGAT GCCTTTGCAC
GTCCCCATGG CGGCGTCCAT CTGGCGCGCG ATGTCGCTCG CGGAGCGCGA ACTGACCTCG
CTCGGCATCC ATCGCTTCGT CGTCTCCGGC ATTTCGAAAC GTGCTTGGAC CACCTGGCTT
GCGCTGATCG GAGACCAACG CGTCGATGCC ATCGCGCCCT TCGCGATCGA TCTGCTCTCG
ACACGAGCCG CGCTCGAGAA CATGTATCGT TCATACGGCG GGAATTGGCC GCTGGCCTTC
TATCCGTATT ACGCGGAGGG TATCGACCGA ACGCTAGACA GCCCGGCCTT CGGCCTGCTG
ATGCGTATCG AAGATCCGCT TTCGTATCTC GGCACGCGCC ATAGCTCGCG CCTGGCCGTG
CCGAAATATA TCGTCAACGC AAGCGGCGAC GATTTTTTCG TGCCGGACAA TTCGCAACGC
TATTTCGACA AGCTTCCCGG TGCGAAGGCG CTACGCATGG TGCCCAATTC CTCGCACTCG
GACATTCGCC GCGCCACGCT CGATTCTCTC GTCCCGTTCG TCAAGCGCAT TCAGCACGGC
AAGGCATTGC CGCAGGTGGA CGCCGCGCCG ATCGAGACGA ACGGCCAGAC AATACTGCGG
CTGCGCACGT CGGAGCGGCC CCGGCAACTG CTGTTGTGGC AAGCGACGAA TCCGCTCGCG
CGCGACTTCC GTTACGCGTG CGGCATCCGC TATACATCGA CGCCCATCGC GATGAACGGC
GCCCGGCCTC AGCAGTTGGT TCTCGTGCCG CCGACGAACG GATGGCGAGC CTACTTCGTC
GAAGCAACAT TCGACGATGG ATTCGTCGCA ACGAGCCAAA CGTATATTCT CGGCGACGGC
TACCCGAGCA CACCGCCGCC GGCAGTCGGC GGTAGCTGCC GAACGCTGCC CGGCCGAGAC
ACACATTCGT GA
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| Protein sequence | MLSLAYPRAE AAPIAFPCPI DARRDLTDTL ACYRQTVENQ PLNYTMTSIV QLPGIEQRTY
RLVSQSWSPD QLVRPDTWVH EVALYIPQDA LPRRALVIAN DGTRHPGEGE TPRTPNDFLP
DTLADIARST RTAVISVSDV PNQLLSYADD GKPKAEDDSV ARSWTLFMQS PHTRGAMPLH
VPMAASIWRA MSLAERELTS LGIHRFVVSG ISKRAWTTWL ALIGDQRVDA IAPFAIDLLS
TRAALENMYR SYGGNWPLAF YPYYAEGIDR TLDSPAFGLL MRIEDPLSYL GTRHSSRLAV
PKYIVNASGD DFFVPDNSQR YFDKLPGAKA LRMVPNSSHS DIRRATLDSL VPFVKRIQHG
KALPQVDAAP IETNGQTILR LRTSERPRQL LLWQATNPLA RDFRYACGIR YTSTPIAMNG
ARPQQLVLVP PTNGWRAYFV EATFDDGFVA TSQTYILGDG YPSTPPPAVG GSCRTLPGRD
THS
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