| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3898 |
|---|
| Symbol | |
|---|
| ID | 4900302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3807057 |
|---|
| End bp | 3807857 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640137124 |
|---|
| Product | putative phospholipid-binding protein |
|---|
| Protein accession | YP_001068118 |
|---|
| Protein GI | 126451459 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACA GCCGCGTCAG ACAGACGCTA GTCAGAACCA CGCTCGTGAT CGGCCTGTCG
GCCGGCCTCG CCGCCACGCT GCAGGGCTGT GTGCTCGCGG TCGCCGGCGC GGCGGCGGGC
GGCGGCGCGC TCGTCGCGAC CGATCGCCGC ACGCTCGGCG CGCAGACCGA GGATCGCGAG
ATCCAGGTGA AGGCGTTGAC GCAGATGAAC AACGGGCTGC CGGACGGCTC GCACGTGAAC
GTGACGGTGT TCAACCGCCG CGTGCTGCTG ACGGGCGAAG TGCCGAGCGA TGCCGCTAAG
CAGCGCGCCG AAGAGATCGT CCGAGCGATC AACAACGTGA ACGCGATCGT CAACGAGCTC
GCGGTGGGGC CGGCGAGTTC GCTGTCTGAT CGGGCGAACG ATTCGTATCT CGAGGGCCGC
GTGAAGACCG CGATGATCGC CGAGAAGGGG ATTTCCGCGA ACAACTACAA AGTGGTGTGC
GAGCGCGGCA ACGTTTATTT GATGGGCCTC GTGACGACCG ACGAAGGCAG CCGGGGCGCG
GATGTCGCGA GCCGCGTGCC GGGCGTCGAG AAGGTCGTCA AGGTGTTCCA GTACATCAAG
CCGCAGGATG CGCAGGCGCT GACGGCGGCA ACGCCCGCGA GCGGCGCGTC GGCTGCCGCG
GCGCCCGCGA CGGCGCCCGA AGGCGCGACG GTGGGGGCGG TGCCGGATTC GAGCGTCACC
GCGACACCGC TATCGGCGCC GGCGCCGGTT TCCAATTCGT CGAACGTGCA TCCGGGCAAT
CCGAAGGCGG GGACGCCGTG A
|
|---|
| Protein sequence | MSNSRVRQTL VRTTLVIGLS AGLAATLQGC VLAVAGAAAG GGALVATDRR TLGAQTEDRE
IQVKALTQMN NGLPDGSHVN VTVFNRRVLL TGEVPSDAAK QRAEEIVRAI NNVNAIVNEL
AVGPASSLSD RANDSYLEGR VKTAMIAEKG ISANNYKVVC ERGNVYLMGL VTTDEGSRGA
DVASRVPGVE KVVKVFQYIK PQDAQALTAA TPASGASAAA APATAPEGAT VGAVPDSSVT
ATPLSAPAPV SNSSNVHPGN PKAGTP
|
|---|
| |