| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3490 |
|---|
| Symbol | |
|---|
| ID | 4900271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3395170 |
|---|
| End bp | 3396144 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640136716 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_001067727 |
|---|
| Protein GI | 126454656 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCCGC CGGAAATCTC CGGCGCGCGC GTCTGGTTCG CCGGAGTTCA TCGCACCATG
AACAAAACGC CCATGACGCT CGCCTTGAAC GGCGCGACCG CCGACCGCCC CGACACGCCG
GGCATGCCCG ACGCGACGCT CGCCGACAGC ATCGGCGCGA CCAGCACGCC GCTCGATCTC
GCCGCGCAGC AGGCGGGCAC GCAAACGCTG CTGCGCGGGC TCGCGATTCT CGAGGCGGTC
GCGGGCGGCG CGCGCGACAT GCGCGCGATC GGCGCCGCGC TCGGCACGAC GCGCAGCACG
ACGCACCGTC TCGTCAGCAG CCTCGTGCAG GCGCGCTATC TGCGCCAGGT GCAAGGCGGC
TATCTGCTCG GCCCGAAGCT GATCGAGCTT GGCACGATCG CGCTCGAGCA GATGCCGCTC
ACGGCGGTCG CGCGCCCGCA TCTCGAGGCG CTCGCGCAAG CGACGCTCGA CACGATCCAC
CTCGGCGTGC GCGACGGCGA CGACGTGCTC TACATCGACA AGATTCCCGG CACGCGCGGC
CTGGAGATGC GCTCGCGGAT CGGTCACCGG ATGCCGCTCG CGTCGACGGG GATCGGCAAG
GCGATGATGC TCGACCTCGA TCCCGACACG TGGCGCTCGC TGTTCGACGC GTCCAAGCGC
GCGCTCGCGG GGGTGAACTT CAAGCCGGAT CGCCGGCCCG ACGTCGGCAC GTTCCTGCAG
CGAATGGCGC ACTATGCGGC GGGCGGCTAC ACGTTCGATC TCGAGGAAAA CGAAACGTCG
ATTCGCTGCG TCGCCGCGCC GGTGCGCGAT GCGTCGGGCG CGATCGTCGC CGCGCTGTCG
GTCGCAAGCA CGATTCCGTA CATGTCGCTC GACCGGATGA ACGAGCTCGT GCCGCTCGTG
CAGCGCGGCG CGCGCGCGAT TTCGGCCGAT CTCGGCTGGA GCGCGCCGCA GGCGACGCGC
CGGATCAAGC GATGA
|
|---|
| Protein sequence | MRPPEISGAR VWFAGVHRTM NKTPMTLALN GATADRPDTP GMPDATLADS IGATSTPLDL
AAQQAGTQTL LRGLAILEAV AGGARDMRAI GAALGTTRST THRLVSSLVQ ARYLRQVQGG
YLLGPKLIEL GTIALEQMPL TAVARPHLEA LAQATLDTIH LGVRDGDDVL YIDKIPGTRG
LEMRSRIGHR MPLASTGIGK AMMLDLDPDT WRSLFDASKR ALAGVNFKPD RRPDVGTFLQ
RMAHYAAGGY TFDLEENETS IRCVAAPVRD ASGAIVAALS VASTIPYMSL DRMNELVPLV
QRGARAISAD LGWSAPQATR RIKR
|
|---|
| |