Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3317 |
Symbol | hrcA |
ID | 4901302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3234181 |
End bp | 3235203 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640136543 |
Product | heat-inducible transcription repressor |
Protein accession | YP_001067554 |
Protein GI | 126455393 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATC CACGCGCACG AACCCTCCTC AAGACACTGA TCGAGCGGTA TATCGCCGAC GGTCAGCCGG TCGGATCGCG CACGTTGTCT CGTTATTCCG GGCTCGAGCT GAGCCCGGCG ACGATCCGCA ACGTGATGTC CGATCTGGAG GAGCTCGGCC TCGTGTCGAG CCCGCATACG TCGGCCGGCC GGGTACCGAC GCCGCGCGGC TACCGGCTGT TCGTCGACAC GATGCTGACC GTCGAGTCGC CGATCGATTC CGACGCGGTC ACGCGGCTCG TGCAGACCAC GCTGCAGGCG GGCGAGCCGC AGCAGCGGGT CGTCGCGGCC GCGGCGAGCG TGCTGTCGAA CCTGTCGCAG TTCGCGGGCG TCGTGCTCAC GCCGCGCCGC AGCCACGTGT TCAAGCAGAT CGAATTCCTG CGCCTGTCGG ACAAGCGGAT CCTCCTCATC ATCGTGACGC CCGAAGGCGA CGTGCAGAAC CGCATGATCG CGACGCAGCG CGACTACGCG CCCGCGCAGC TCACCGAGGC GTCGAACTAC ATCAACGCGC ACTTCGCCGG CCTGTCGTTC GACGAGGTGC GCCGCCGGCT GCGCGAGGAA ATCGATCAGT TGCGCGGCGA CATGACGGCG CTGATGCACG CGGCCGTCAC GGCGAGCACC GAGGAGCCCG ACGACGAGGA AACCGTGCTG ATCTCCGGCG AGCGCAACCT GCTCGAGGTG GCCGATCTGT CGTCCGACAT GGCGCGCCTG CGCAAGCTGT TCGACGTGTT CGACCAGAAG ACGAGCCTGC TGCAACTGCT CGACGTGTCG AGCCACGCGC AAGGGGTGCA GATCTTCATC GGCGGCGAAT CGACGCTCGT GCCGATCGAC GAGATGAGCG TCGTGACCGC GCCGTACGAG GTCAACGGCA AGATCGTCGG CACGCTCGGC GTGATCGGCC CGACGCGCAT GGCTTACAAC CGCGTGATTC CGATCGTCGA CATCACCGCG CGCCTGCTGT CGCTCACGCT CAGCCAGCAG TAA
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Protein sequence | MLDPRARTLL KTLIERYIAD GQPVGSRTLS RYSGLELSPA TIRNVMSDLE ELGLVSSPHT SAGRVPTPRG YRLFVDTMLT VESPIDSDAV TRLVQTTLQA GEPQQRVVAA AASVLSNLSQ FAGVVLTPRR SHVFKQIEFL RLSDKRILLI IVTPEGDVQN RMIATQRDYA PAQLTEASNY INAHFAGLSF DEVRRRLREE IDQLRGDMTA LMHAAVTAST EEPDDEETVL ISGERNLLEV ADLSSDMARL RKLFDVFDQK TSLLQLLDVS SHAQGVQIFI GGESTLVPID EMSVVTAPYE VNGKIVGTLG VIGPTRMAYN RVIPIVDITA RLLSLTLSQQ
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