| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3118 |
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| Symbol | rfaC |
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| ID | 4902997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3037968 |
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| End bp | 3039035 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640136344 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_001067356 |
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| Protein GI | 126452253 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.145361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGCCG CCCGGCGCGA TAAAATCCGT CCTTTCGGTC TGTGCCGGCC GCCGCCGGCC
CTTTTTTTCA GCGTGCAAAA AATTCTGATC GTGCGCGTGT CGTCGCTCGG CGATGTCGTG
CATAACATGC CGGTGATCGC CGATATCCGC CGGCGTCACC CCGATGCGCA GATCGACTGG
CTCGTCGAGG AAGGCTTCGC CGATCTCGTG CGGCTCGTCG ACGGTGTGCG CGACGTGCTG
CCGTTCTCGC TGCGGCGCTG GCGCAAGCGC TTGAGCGCAT CGCAAACGTG GCGCGAGATC
CGCGCGTTCC GGCGGCGCCT CGCCGAGGAG CGCTACGACC TCGTGATCGA CTGCCAGGGG
CTCATCAAGA CCGCGTGGGT CGCGAGCTGG GCGCGCGGGC CGCTTGTCGG CCTCGGCAAC
CGCACCGACG GCGCCGGCTA CGAGTGGCCG GTGCGCTTCT TCTACGACAG GCGGGTGCCG
ATCGCGCCGC GCACGCACGT CGTCGAGCGC TCGCGGCAGC TCGTCGCGGC GGCGCTGGGA
GACCCCGCGC CGGCGCCCGG CGAGCCGATC GATTTCGGCC TCGACACGCA TGGCGCGGCG
CGCGCGCTCG CGGCGCTCGA TTTGAATCTG CCGGTGCCCT ACGTGGTATT CGTGCACGCG
ACCTCGCGCG CCGACAAGCA GTGGCCCGAC GAAGCGTGGA CCGGCCTCGG CGAGGCGCTC
GTGCGGCGCG GCGCGTCGCT CGTGCTGCCG TGGGGCAGCG ACGCCGAGCG CGCGACGAGC
GAGCGCCTCG CGAAGGCGTT CGGCGCGGCG GCGATCGTGC CGCCGAAGCT GTCGCTGCCC
GCGGTCGTCG GCCTCGTCGA CGGCGCGGCG GCGACGGTCG GCGTCGATAC CGGCCTCGTC
CACATCGCGG CGGCGCTCAA GCGTCCGACC GTCGAACTGT ACAATTTCGC GACAGCCTGG
CGCACGGGCG GCTACTGGTC GCCCAACGTC GTCAATCTCG GCACCGCCGG CGCGCCGCCG
TCCCTTTCGC AGGCGAAGGA CGCACTCGCG TCGTTCGGCC TCTTGTAA
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| Protein sequence | MSAARRDKIR PFGLCRPPPA LFFSVQKILI VRVSSLGDVV HNMPVIADIR RRHPDAQIDW
LVEEGFADLV RLVDGVRDVL PFSLRRWRKR LSASQTWREI RAFRRRLAEE RYDLVIDCQG
LIKTAWVASW ARGPLVGLGN RTDGAGYEWP VRFFYDRRVP IAPRTHVVER SRQLVAAALG
DPAPAPGEPI DFGLDTHGAA RALAALDLNL PVPYVVFVHA TSRADKQWPD EAWTGLGEAL
VRRGASLVLP WGSDAERATS ERLAKAFGAA AIVPPKLSLP AVVGLVDGAA ATVGVDTGLV
HIAAALKRPT VELYNFATAW RTGGYWSPNV VNLGTAGAPP SLSQAKDALA SFGLL
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